| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| dlx1a | 0.787 | meis1b | -0.087 |
| dlx5a | 0.633 | ebf3a | -0.084 |
| dlx2b | 0.556 | mab21l1 | -0.081 |
| arxa | 0.516 | nrn1a | -0.077 |
| dlx6a | 0.466 | mab21l2 | -0.075 |
| CU929240.1 | 0.416 | pcna | -0.074 |
| arxb | 0.387 | npm1a | -0.073 |
| sp9 | 0.378 | irx1a | -0.072 |
| nkx2.1 | 0.223 | hmgb2a | -0.071 |
| foxg1a | 0.219 | pax3a | -0.071 |
| isl1 | 0.216 | adcyap1b | -0.070 |
| vax1 | 0.209 | lig1 | -0.067 |
| gsx2 | 0.196 | hoxb3a | -0.067 |
| lhx6 | 0.188 | en2b | -0.067 |
| metap1d | 0.186 | mcm6 | -0.067 |
| gad2 | 0.169 | dkc1 | -0.066 |
| sox4a | 0.150 | nop58 | -0.066 |
| lhx8b | 0.142 | gas1b | -0.066 |
| slc32a1 | 0.138 | ccnd1 | -0.066 |
| LOC103911600 | 0.135 | chaf1a | -0.065 |
| cxxc4 | 0.129 | akap12b | -0.065 |
| sept5a | 0.124 | mdka | -0.065 |
| myt1a | 0.122 | nhlh2 | -0.064 |
| si:dkey-175g6.2 | 0.121 | meis2b | -0.064 |
| sox1b | 0.120 | tuba8l4 | -0.064 |
| LO018196.1 | 0.117 | anp32b | -0.064 |
| eno4 | 0.115 | irx5a | -0.064 |
| myt1b | 0.113 | cdca7a | -0.063 |
| insm1b | 0.112 | ranbp1 | -0.063 |
| hmx3a | 0.111 | id1 | -0.063 |
| rrad | 0.109 | fbl | -0.062 |
| foxd1 | 0.107 | fen1 | -0.061 |
| nrp2b | 0.107 | irx3b | -0.061 |
| six3a | 0.106 | snu13b | -0.061 |
| mir7a-1 | 0.105 | irx3a | -0.061 |