| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| arf4b | 0.200 | sox3 | -0.116 |
| pitx2 | 0.190 | id1 | -0.104 |
| pou4f2 | 0.179 | cxcr4b | -0.098 |
| dkk1b | 0.172 | sox19a | -0.081 |
| grxcr2 | 0.169 | zic2b | -0.078 |
| FP102169.1 | 0.161 | inka1a | -0.076 |
| diras1a | 0.157 | asb11 | -0.073 |
| lhx1a | 0.155 | cited4b | -0.068 |
| gata5 | 0.154 | sb:cb81 | -0.065 |
| gata6 | 0.150 | cxcr4a | -0.061 |
| sox32 | 0.147 | nnr | -0.061 |
| osr1 | 0.143 | foxd5 | -0.058 |
| trib3 | 0.142 | si:ch1073-80i24.3 | -0.056 |
| CR381686.2 | 0.139 | mych | -0.047 |
| mespab | 0.137 | stmn1a | -0.046 |
| sp5a | 0.133 | aldob | -0.046 |
| dusp4 | 0.133 | si:ch211-170d8.2 | -0.042 |
| lft2 | 0.132 | cbx3a | -0.041 |
| fgf8a | 0.132 | ccnd1 | -0.040 |
| lft1 | 0.128 | zgc:64022 | -0.039 |
| fgf3 | 0.128 | pfkfb4b | -0.039 |
| fscn1a | 0.127 | sema6dl | -0.039 |
| flrt3 | 0.124 | mex3b | -0.039 |
| irx3a | 0.124 | atp1b1a | -0.038 |
| foxa | 0.123 | nasp | -0.038 |
| efnb2b | 0.123 | CU570769.1 | -0.038 |
| zic2a | 0.122 | shisa2a | -0.037 |
| ndr2 | 0.122 | nop10 | -0.037 |
| CR769772.3 | 0.122 | ube2g1b | -0.036 |
| ism1 | 0.121 | rps27l | -0.036 |
| si:ch73-256j6.4 | 0.118 | si:ch211-152c2.3 | -0.036 |
| foxa3 | 0.116 | add3b | -0.035 |
| glis2b | 0.116 | fermt2 | -0.035 |
| LOC103912066 | 0.115 | tpx2 | -0.034 |
| kcnj2b | 0.115 | snai2 | -0.034 |