| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nanog | 0.320 | NC-002333.4 | -0.247 |
| gtf2a1 | 0.278 | ncl | -0.178 |
| cldnd | 0.272 | eef1a1l1 | -0.177 |
| npc2 | 0.272 | ybx1 | -0.173 |
| ccna1 | 0.270 | hmgb2a | -0.162 |
| blf | 0.269 | si:ch73-1a9.3 | -0.157 |
| glulb | 0.264 | hspb1 | -0.156 |
| rbm7 | 0.261 | nucks1a | -0.154 |
| spink2.1 | 0.257 | rplp1 | -0.154 |
| ctsla | 0.255 | hmgn6 | -0.153 |
| mkrn4 | 0.255 | akap12b | -0.152 |
| h1m | 0.246 | si:ch211-222l21.1 | -0.151 |
| acp5a | 0.244 | zgc:110425 | -0.151 |
| ccna2 | 0.244 | ptmab | -0.147 |
| lamp2 | 0.241 | efnb2b | -0.144 |
| zgc:173742 | 0.239 | hmga1a | -0.144 |
| inka1a | 0.237 | tbxta | -0.141 |
| si:dkey-68o6.5 | 0.236 | nop2 | -0.136 |
| h2af1al | 0.233 | npm1a | -0.136 |
| zgc:77118 | 0.231 | rps6 | -0.135 |
| pttg1 | 0.224 | wu:fb97g03 | -0.134 |
| ccnb1 | 0.223 | anp32e | -0.130 |
| gdf3 | 0.222 | msgn1 | -0.125 |
| cited4b | 0.219 | rps7 | -0.123 |
| zgc:100951 | 0.218 | rpl7a | -0.122 |
| zgc:56676 | 0.217 | her6 | -0.122 |
| oclna | 0.213 | wnt11f2 | -0.118 |
| epcam | 0.212 | rps4x | -0.118 |
| si:ch211-173m16.2 | 0.210 | cdx4 | -0.118 |
| si:dkey-42i9.4 | 0.209 | rpsa | -0.117 |
| thy1 | 0.209 | rps15a | -0.117 |
| zgc:113424 | 0.207 | si:ch211-152c2.3 | -0.116 |
| cdc6 | 0.205 | si:dkey-108k21.10 | -0.115 |
| cnot8 | 0.203 | kif20bb | -0.113 |
| gpkow | 0.203 | stm | -0.113 |