| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nanog | 0.236 | NC-002333.4 | -0.212 |
| blf | 0.224 | hmgb2a | -0.117 |
| ccna1 | 0.217 | si:ch211-222l21.1 | -0.115 |
| gtf2a1 | 0.210 | anp32e | -0.112 |
| mkrn4 | 0.208 | eef1a1l1 | -0.109 |
| glulb | 0.206 | add3b | -0.107 |
| cdca7a | 0.205 | si:ch73-1a9.3 | -0.105 |
| zgc:100951 | 0.205 | apoc1 | -0.101 |
| inka1a | 0.200 | nop2 | -0.100 |
| lamp2 | 0.197 | hspb1 | -0.100 |
| npc2 | 0.197 | zgc:110425 | -0.099 |
| cldnd | 0.194 | hmgn6 | -0.098 |
| zgc:56676 | 0.194 | sox2 | -0.097 |
| spink2.1 | 0.191 | rplp1 | -0.096 |
| ccna2 | 0.187 | ptmab | -0.096 |
| rbm7 | 0.186 | ncl | -0.096 |
| h1m | 0.185 | top2a | -0.094 |
| ctsla | 0.185 | crabp2b | -0.092 |
| si:dkey-42i9.4 | 0.183 | pkdccb | -0.091 |
| zgc:173742 | 0.182 | mt-co1 | -0.088 |
| acp5a | 0.182 | alcamb | -0.087 |
| gdf3 | 0.174 | hmgn2 | -0.086 |
| zgc:77118 | 0.173 | cdx4 | -0.085 |
| dctpp1 | 0.171 | rps6 | -0.084 |
| dnajc1 | 0.171 | hmga1a | -0.083 |
| fdx1 | 0.167 | ywhaqb | -0.083 |
| aktip | 0.167 | tbxta | -0.083 |
| rcc1 | 0.166 | polr3gla | -0.082 |
| oclna | 0.166 | npm1a | -0.082 |
| h2af1al | 0.165 | ybx1 | -0.082 |
| ccnb2 | 0.165 | si:ch211-152c2.3 | -0.082 |
| si:dkey-68o6.5 | 0.164 | rpl7a | -0.081 |
| rcor1 | 0.161 | serpinh1b | -0.078 |
| pttg1 | 0.159 | kif20bb | -0.077 |
| wee2 | 0.159 | rps12 | -0.077 |