| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| XLOC-003690 | 0.445 | stmn1b | -0.301 |
| notch3 | 0.419 | gng3 | -0.273 |
| XLOC-003689 | 0.412 | sncb | -0.267 |
| cldn5a | 0.410 | rtn1b | -0.256 |
| mdka | 0.379 | gpm6ab | -0.252 |
| plp1a | 0.372 | atp6v0cb | -0.250 |
| her15.1 | 0.369 | elavl4 | -0.247 |
| sox3 | 0.367 | vamp2 | -0.237 |
| gfap | 0.361 | stmn2a | -0.229 |
| id1 | 0.351 | ywhag2 | -0.228 |
| gas1b | 0.341 | rtn1a | -0.227 |
| si:ch73-21g5.7 | 0.341 | stx1b | -0.226 |
| her2 | 0.338 | stxbp1a | -0.221 |
| lfng | 0.336 | atp6v1e1b | -0.219 |
| sdc4 | 0.336 | ckbb | -0.218 |
| her12 | 0.333 | elavl3 | -0.218 |
| nrarpb | 0.331 | zgc:65894 | -0.215 |
| zgc:165461 | 0.328 | gap43 | -0.215 |
| gpm6bb | 0.327 | mllt11 | -0.214 |
| msi1 | 0.325 | fez1 | -0.213 |
| tspan7 | 0.323 | ywhah | -0.212 |
| XLOC-003692 | 0.315 | zc4h2 | -0.211 |
| angptl4 | 0.309 | snap25a | -0.211 |
| notch1b | 0.307 | rnasekb | -0.210 |
| her4.1 | 0.306 | nsg2 | -0.208 |
| her4.2 | 0.305 | tmsb2 | -0.207 |
| sb:cb81 | 0.302 | csdc2a | -0.205 |
| boc | 0.301 | si:dkeyp-75h12.5 | -0.202 |
| msna | 0.297 | tmem59l | -0.199 |
| sparc | 0.295 | atpv0e2 | -0.198 |
| COX7A2 (1 of many) | 0.293 | aplp1 | -0.198 |
| lrrn1 | 0.288 | gng2 | -0.196 |
| dnmbp | 0.286 | atp6v1g1 | -0.196 |
| tuba8l | 0.286 | id4 | -0.195 |
| abhd6a | 0.285 | calm1a | -0.193 |