| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| elavl3 | 0.412 | id1 | -0.312 |
| stxbp1a | 0.391 | XLOC-003690 | -0.273 |
| myt1b | 0.385 | mdka | -0.256 |
| stx1b | 0.365 | cldn5a | -0.255 |
| nsg2 | 0.338 | msna | -0.233 |
| lhx1a | 0.335 | hmgb2a | -0.228 |
| rbfox3a | 0.335 | her15.1 | -0.226 |
| cplx2l | 0.330 | sox3 | -0.222 |
| gng2 | 0.329 | sparc | -0.220 |
| ywhah | 0.329 | sdc4 | -0.218 |
| jagn1a | 0.328 | vamp3 | -0.217 |
| vamp2 | 0.327 | notch3 | -0.215 |
| sncb | 0.325 | fosab | -0.212 |
| gng3 | 0.322 | cd82a | -0.212 |
| thsd7aa | 0.319 | msi1 | -0.210 |
| syt2a | 0.316 | COX7A2 (1 of many) | -0.202 |
| rtn1a | 0.316 | tuba8l | -0.201 |
| atp6v0cb | 0.316 | sox19a | -0.198 |
| ube2ql1 | 0.315 | fabp7a | -0.196 |
| cplx2 | 0.314 | her12 | -0.195 |
| tmem59l | 0.310 | sox2 | -0.193 |
| nrxn1a | 0.309 | her2 | -0.191 |
| stmn1b | 0.304 | btg2 | -0.190 |
| snap25a | 0.303 | tuba8l4 | -0.190 |
| zc4h2 | 0.299 | selenoh | -0.188 |
| rbfox1 | 0.299 | pcna | -0.188 |
| ebf3a | 0.299 | atp1a1b | -0.188 |
| atcaya | 0.299 | zgc:56493 | -0.187 |
| ywhag2 | 0.296 | XLOC-003689 | -0.186 |
| sncgb | 0.296 | dut | -0.185 |
| elavl4 | 0.291 | si:ch73-281n10.2 | -0.181 |
| csdc2a | 0.289 | ccng1 | -0.180 |
| pax2a | 0.288 | zfp36l1a | -0.178 |
| robo3 | 0.287 | ccnd1 | -0.177 |
| si:dkey-280e21.3 | 0.287 | cd63 | -0.176 |