Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pou4f1 | 0.166 | si:ch211-222l21.1 | -0.041 |
| eya4 | 0.138 | hmgb2a | -0.041 |
| sst6 | 0.124 | hmga1a | -0.040 |
| ppp1r1c | 0.121 | si:ch73-281n10.2 | -0.036 |
| six2b | 0.118 | id1 | -0.034 |
| six1b | 0.112 | XLOC-003690 | -0.032 |
| isl2b | 0.110 | her15.1 | -0.032 |
| cbfb | 0.103 | hmgb2b | -0.031 |
| emb | 0.102 | mdka | -0.031 |
| ntrk1 | 0.096 | sox3 | -0.031 |
| mmp25b | 0.096 | pcna | -0.031 |
| foxg1d | 0.095 | stmn1a | -0.031 |
| kifl | 0.093 | btg2 | -0.030 |
| ptgir | 0.091 | XLOC-003689 | -0.030 |
| si:ch211-56a11.2 | 0.080 | cx43.4 | -0.029 |
| pcbp4 | 0.080 | cldn5a | -0.029 |
| nrg1 | 0.078 | tspan7 | -0.029 |
| slc17a7b | 0.078 | mki67 | -0.028 |
| syt1b | 0.077 | vamp3 | -0.028 |
| frmpd1 | 0.077 | XLOC-003692 | -0.028 |
| anxa13l | 0.076 | ccnd1 | -0.028 |
| CABZ01118738.1 | 0.076 | h2afvb | -0.027 |
| prkg1a | 0.073 | chaf1a | -0.027 |
| lgi2b | 0.073 | cdca7b | -0.027 |
| vim | 0.072 | sdc4 | -0.027 |
| tubb2 | 0.071 | msi1 | -0.027 |
| six1a | 0.070 | sox19a | -0.027 |
| ngfrb | 0.069 | msna | -0.026 |
| tagln3b | 0.068 | tuba8l | -0.026 |
| zgc:158291 | 0.068 | dut | -0.026 |
| islr2 | 0.067 | COX7A2 (1 of many) | -0.026 |
| tuba8l3 | 0.067 | mcm7 | -0.026 |
| eya1 | 0.067 | lig1 | -0.026 |
| nhsl1a | 0.065 | banf1 | -0.026 |
| CU862020.1 | 0.065 | slbp | -0.025 |