Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| CT030048.1 | 0.260 | mdka | -0.033 |
| LOC108190565 | 0.235 | XLOC-003689 | -0.032 |
| BX005005.1 | 0.168 | her15.1 | -0.032 |
| pou4f1 | 0.167 | cldn5a | -0.031 |
| si:ch211-250k18.5 | 0.154 | rps20 | -0.030 |
| LOC101885530 | 0.140 | XLOC-003690 | -0.030 |
| cbfb | 0.138 | XLOC-003692 | -0.029 |
| vip | 0.134 | tspan7 | -0.028 |
| CR762470.1 | 0.122 | hmgb2a | -0.028 |
| si:dkey-238o14.3 | 0.108 | her12 | -0.028 |
| gata2b | 0.106 | sox3 | -0.027 |
| tbx20 | 0.098 | her4.2 | -0.027 |
| BX324153.1 | 0.098 | sb:cb81 | -0.027 |
| sst6 | 0.097 | rpl7a | -0.026 |
| tubb2 | 0.093 | si:ch211-222l21.1 | -0.025 |
| ywhag1 | 0.092 | eef1b2 | -0.025 |
| klhl38a | 0.091 | rpl12 | -0.024 |
| CT025651.1 | 0.090 | gfap | -0.024 |
| rtn4r | 0.087 | sox19a | -0.024 |
| cyp26c1 | 0.087 | foxp4 | -0.024 |
| si:dkey-62k3.6 | 0.087 | msna | -0.024 |
| XLOC-016049 | 0.083 | rpsa | -0.024 |
| ankrd1a | 0.083 | vamp3 | -0.024 |
| emb | 0.081 | dla | -0.023 |
| rab6ba | 0.081 | abhd6a | -0.023 |
| nitr4a | 0.080 | COX7A2 (1 of many) | -0.023 |
| stmn3 | 0.079 | notch1a | -0.023 |
| gpr158a | 0.079 | id1 | -0.023 |
| cacnb3b | 0.078 | notch3 | -0.022 |
| kcnip3a | 0.077 | si:ch73-21g5.7 | -0.022 |
| gpx2 | 0.077 | rps27.1 | -0.022 |
| snap25b | 0.077 | hmgb2b | -0.022 |
| cckb | 0.076 | rplp1 | -0.022 |
| unc5da | 0.075 | si:ch73-265d7.2 | -0.022 |
| si:ch73-119p20.1 | 0.074 | zbtb16a | -0.022 |