Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| XLOC-003689 | 0.075 | sncb | -0.043 |
| XLOC-003690 | 0.075 | ywhag2 | -0.039 |
| notch3 | 0.075 | atp6v0cb | -0.038 |
| plp1a | 0.070 | gng3 | -0.038 |
| LOC101884718 | 0.069 | stmn2a | -0.037 |
| her15.1 | 0.069 | stx1b | -0.036 |
| XLOC-003692 | 0.063 | snap25a | -0.036 |
| si:ch73-21g5.7 | 0.063 | vamp2 | -0.036 |
| cldn5a | 0.063 | stxbp1a | -0.035 |
| notch1b | 0.063 | gapdhs | -0.035 |
| lfng | 0.062 | rtn1b | -0.035 |
| msi1 | 0.061 | tpi1b | -0.035 |
| lrrn1 | 0.060 | zgc:65894 | -0.034 |
| her2 | 0.060 | calm2a | -0.034 |
| gpm6bb | 0.059 | tmsb2 | -0.034 |
| her4.2 | 0.059 | atp6v1e1b | -0.033 |
| mdka | 0.059 | elavl4 | -0.033 |
| abhd6a | 0.058 | gpm6ab | -0.033 |
| sox3 | 0.058 | sv2a | -0.033 |
| nrarpb | 0.058 | gap43 | -0.033 |
| gas1b | 0.057 | atpv0e2 | -0.032 |
| zgc:165461 | 0.056 | sncgb | -0.032 |
| gfap | 0.055 | map1aa | -0.031 |
| her4.1 | 0.055 | atp5if1b | -0.030 |
| CU634008.1 | 0.054 | cplx2 | -0.030 |
| her12 | 0.053 | stmn1b | -0.030 |
| dla | 0.052 | ywhag1 | -0.030 |
| tspan7 | 0.052 | sypb | -0.030 |
| LOC798783 | 0.052 | ckbb | -0.029 |
| boc | 0.051 | si:dkeyp-72g9.4 | -0.029 |
| angptl4 | 0.051 | syt1a | -0.029 |
| zgc:110796 | 0.051 | nrxn1a | -0.029 |
| cd82a | 0.051 | camk2d2 | -0.029 |
| her4.4 | 0.049 | atp6v1g1 | -0.029 |
| LOC101882472 | 0.049 | eno1a | -0.029 |