Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| LOC110438219 | 0.428 | lsm12b | -0.036 |
| si:dkey-125e8.3 | 0.348 | si:dkey-276j7.1 | -0.029 |
| chrna6 | 0.242 | rps19 | -0.028 |
| ptx3b | 0.198 | polr3gla | -0.028 |
| si:ch211-207c6.2 | 0.194 | aurka | -0.026 |
| LRRC56 | 0.188 | nop53 | -0.026 |
| bfsp2 | 0.182 | sox3 | -0.026 |
| XLOC-039931 | 0.181 | hs6st2 | -0.025 |
| cyp2p6 | 0.176 | p4hb | -0.025 |
| igfbp2a | 0.176 | rps6 | -0.025 |
| bace1 | 0.168 | hdlbpa | -0.024 |
| vsx1 | 0.164 | smfn | -0.024 |
| ftr16 | 0.147 | cxcr4b | -0.024 |
| sostdc1a | 0.147 | lsm3 | -0.024 |
| TTC9 | 0.143 | calm3b | -0.024 |
| tmem119a | 0.137 | kctd5a | -0.023 |
| ccka | 0.136 | smarca5 | -0.023 |
| adgrb1a | 0.131 | ctnnb1 | -0.023 |
| si:dkey-28d5.13 | 0.128 | si:ch211-113a14.18 | -0.023 |
| pknox1.2 | 0.125 | sb:cb81 | -0.023 |
| slitrk3a | 0.118 | lmbr1l | -0.023 |
| olig2 | 0.118 | si:ch211-262h13.3 | -0.022 |
| sema3aa | 0.115 | ccdc47 | -0.022 |
| grin2aa | 0.113 | ndufa8 | -0.022 |
| LOC100536647 | 0.111 | tmem136a | -0.022 |
| sntg1 | 0.111 | si:ch211-152c2.3 | -0.022 |
| aclyb | 0.109 | sde2 | -0.022 |
| capn2b | 0.103 | ncoa5 | -0.022 |
| LOC110439436 | 0.103 | ccnb3 | -0.022 |
| LOC110440095 | 0.103 | baxa | -0.022 |
| csrp3 | 0.102 | si:ch1073-80i24.3 | -0.022 |
| alpk3a | 0.101 | chaf1b | -0.022 |
| si:ch211-214p16.3 | 0.100 | eif1axa | -0.022 |
| angptl5 | 0.096 | lsm6 | -0.022 |
| ttbk1a | 0.094 | rbm6 | -0.022 |