Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| si:dkeyp-114g9.1 | 0.053 | tuba1c | -0.028 |
| pou5f3 | 0.051 | gpm6aa | -0.027 |
| nnr | 0.050 | nova2 | -0.025 |
| zgc:56699 | 0.047 | rtn1a | -0.025 |
| si:ch1073-80i24.3 | 0.046 | marcksl1a | -0.025 |
| h1m | 0.045 | stmn1b | -0.024 |
| polr3gla | 0.045 | atp6v0cb | -0.023 |
| asb11 | 0.044 | elavl3 | -0.023 |
| s100a1 | 0.044 | rnasekb | -0.023 |
| si:ch211-173m16.2 | 0.044 | ckbb | -0.022 |
| ddx4 | 0.043 | gpm6ab | -0.022 |
| si:ch73-160h15.3 | 0.043 | hbbe1.3 | -0.022 |
| si:dkey-228b2.6 | 0.042 | fam168a | -0.021 |
| tbx16 | 0.041 | gng3 | -0.021 |
| nanog | 0.040 | hmgb3a | -0.021 |
| aldob | 0.039 | sncb | -0.021 |
| BX530721.1 | 0.039 | vamp2 | -0.021 |
| eif4ebp3l | 0.039 | gapdhs | -0.020 |
| lrwd1 | 0.039 | hbae1.1 | -0.020 |
| si:dkey-90l23.1 | 0.039 | hbae3 | -0.020 |
| zgc:77118 | 0.039 | mdkb | -0.020 |
| avd | 0.038 | tuba1a | -0.020 |
| cldnd | 0.038 | cspg5a | -0.019 |
| eif4e1b | 0.038 | tmsb | -0.019 |
| LOC101885477 | 0.038 | tubb5 | -0.019 |
| LOC101885485 | 0.038 | calm1a | -0.019 |
| mcm6l | 0.038 | atp6v1e1b | -0.018 |
| stm | 0.038 | atpv0e2 | -0.018 |
| BX005461.1 | 0.037 | elavl4 | -0.018 |
| LOC100008030 | 0.037 | epb41a | -0.018 |
| si:ch211-286b5.4 | 0.037 | fabp3 | -0.018 |
| si:dkey-68o6.5 | 0.037 | fez1 | -0.018 |
| zgc:100951 | 0.037 | gng2 | -0.018 |
| ccna1 | 0.036 | hbbe1.1 | -0.018 |
| CR450793.1 | 0.036 | rtn1b | -0.018 |