| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| dlx2b | 0.450 | cldnh | -0.188 |
| sp6 | 0.409 | krt4 | -0.152 |
| msx2a | 0.396 | cldnb | -0.144 |
| cldn5a | 0.382 | si:dkey-87o1.2 | -0.123 |
| ecm2 | 0.381 | wu:fb18f06 | -0.112 |
| jag2a | 0.381 | si:ch211-195b11.3 | -0.111 |
| shha | 0.370 | fabp3 | -0.108 |
| crip3 | 0.364 | cyt1 | -0.107 |
| si:ch211-246m6.5 | 0.357 | spint2 | -0.106 |
| irx1b | 0.341 | si:dkey-33i11.4 | -0.105 |
| plekhh1 | 0.341 | ap1s3b | -0.105 |
| FO744840.1 | 0.336 | s100u | -0.098 |
| alpi.1 | 0.336 | selenow1 | -0.094 |
| cx43 | 0.331 | atp1b1b | -0.092 |
| esama | 0.328 | si:dkey-193p11.2 | -0.089 |
| map7d2b | 0.327 | dnase1l4.1 | -0.089 |
| pcolce2b | 0.325 | nqo1 | -0.087 |
| LOC108181115 | 0.320 | si:ch73-347e22.8 | -0.086 |
| phex | 0.317 | tuba8l2 | -0.086 |
| FO904870.1 | 0.317 | foxi3b | -0.086 |
| pcdh7a | 0.314 | tmed4 | -0.083 |
| prss35 | 0.310 | zgc:110333 | -0.082 |
| si:dkey-178e17.3 | 0.308 | zgc:153284 | -0.082 |
| kazald3 | 0.306 | LOC799574 | -0.081 |
| kctd20 | 0.304 | malb | -0.081 |
| gata6 | 0.300 | BX000438.2 | -0.081 |
| il16 | 0.299 | icn | -0.080 |
| LOC100538221 | 0.295 | gbgt1l4 | -0.078 |
| CSDC2 (1 of many) | 0.293 | cldne | -0.078 |
| ptprub | 0.287 | grhl1 | -0.076 |
| pdx1 | 0.284 | fuca1.1 | -0.076 |
| sgms2a | 0.281 | prr13 | -0.075 |
| eva1ba | 0.279 | zgc:194246 | -0.074 |
| pitx2 | 0.277 | uqcrq | -0.074 |
| cpn1 | 0.277 | cyt1l | -0.074 |