Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tbata | 0.354 | tmsb4x | -0.108 |
| smkr1 | 0.347 | hmgb3a | -0.082 |
| enkur | 0.342 | fabp3 | -0.082 |
| si:ch211-163l21.7 | 0.315 | elavl3 | -0.080 |
| si:ch211-155m12.5 | 0.298 | tmsb | -0.076 |
| daw1 | 0.296 | nova2 | -0.074 |
| tppp3 | 0.294 | ckbb | -0.069 |
| pacrg | 0.292 | rtn1a | -0.068 |
| si:ch211-248e11.2 | 0.284 | stmn1b | -0.067 |
| meig1 | 0.279 | si:ch73-21g5.7 | -0.063 |
| si:dkey-148f10.4 | 0.276 | hnrnpaba | -0.061 |
| krt18a.1 | 0.270 | mdkb | -0.061 |
| foxj1a | 0.258 | myt1b | -0.060 |
| rab36 | 0.256 | nova1 | -0.059 |
| ccdc169 | 0.256 | tmeff1b | -0.059 |
| spag6 | 0.255 | pax3a | -0.059 |
| si:dkey-27p23.3 | 0.255 | gas1b | -0.057 |
| ccdc114 | 0.252 | sox11b | -0.057 |
| zgc:55461 | 0.250 | si:dkey-276j7.1 | -0.057 |
| spata4 | 0.249 | nes | -0.056 |
| dnali1 | 0.249 | nkain1 | -0.055 |
| morn3 | 0.248 | marcksb | -0.055 |
| spata18 | 0.247 | si:ch211-133n4.4 | -0.054 |
| efcab1 | 0.247 | pou3f3b | -0.054 |
| ropn1l | 0.244 | pou3f1 | -0.053 |
| ttc25 | 0.243 | scrt2 | -0.053 |
| cfap126 | 0.241 | mex3b | -0.053 |
| krt8 | 0.240 | si:ch73-386h18.1 | -0.053 |
| si:dkey-42p14.3 | 0.235 | tubb5 | -0.053 |
| si:dkey-11c5.11 | 0.235 | elavl4 | -0.052 |
| col8a1a | 0.235 | FO082781.1 | -0.051 |
| capslb | 0.232 | hmgb1b | -0.051 |
| nme5 | 0.232 | LOC798783 | -0.051 |
| ccdc151 | 0.231 | CU467822.1 | -0.051 |
| capsla | 0.230 | si:ch73-30b17.2 | -0.050 |