Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| LOC103909136 | 0.351 | six1b | -0.067 |
| LOC110440003 | 0.337 | si:dkey-222f2.1 | -0.066 |
| si:ch211-131k2.3 | 0.301 | eya1 | -0.056 |
| grin2cb | 0.285 | srsf3b | -0.048 |
| XLOC-030238 | 0.278 | fabp3 | -0.048 |
| CR388231.2 | 0.272 | eif4h | -0.043 |
| XLOC-039079 | 0.263 | ddx39ab | -0.042 |
| CR339041.1 | 0.254 | ptges3b | -0.041 |
| si:ch211-120k19.1 | 0.226 | si:ch211-152c2.3 | -0.041 |
| RF00377 | 0.221 | her15.1 | -0.039 |
| BX957297.3 | 0.217 | sf3b5 | -0.038 |
| adarb2 | 0.213 | prdx2 | -0.037 |
| BX936415.1 | 0.212 | krt5 | -0.037 |
| pthlha | 0.205 | ranbp1 | -0.036 |
| cntn3b | 0.203 | snrpd2 | -0.036 |
| ssuh2.2 | 0.202 | hypk | -0.035 |
| XLOC-036929 | 0.201 | vcp | -0.035 |
| CABZ01009512.2 | 0.198 | nfyba | -0.034 |
| CR933528.1 | 0.195 | snrpd1 | -0.034 |
| RF00030 | 0.191 | snu13b | -0.034 |
| mmel1 | 0.184 | lmnb2 | -0.034 |
| esrrb | 0.177 | psma3 | -0.034 |
| BX957326.3 | 0.175 | npm1a | -0.034 |
| ppp1r1b | 0.169 | si:ch211-243g18.2 | -0.033 |
| doc2d | 0.168 | ywhaqa | -0.033 |
| pomca | 0.167 | psmc2 | -0.033 |
| BX511265.2 | 0.167 | esd | -0.033 |
| grem1a | 0.167 | sox2 | -0.033 |
| cntn3a.1 | 0.166 | gcsha | -0.032 |
| eomesa | 0.166 | eef1db | -0.032 |
| sb:cb1058 | 0.166 | golt1bb | -0.032 |
| lim2.5 | 0.163 | her4.1 | -0.032 |
| tph1b | 0.161 | lsm3 | -0.032 |
| si:dkey-32n7.4 | 0.159 | srprb | -0.032 |
| BX649434.2 | 0.159 | tmsb | -0.032 |