Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pou5f3 | 0.113 | gpm6aa | -0.044 |
| polr3gla | 0.106 | tuba1c | -0.044 |
| si:ch1073-80i24.3 | 0.103 | rtn1a | -0.042 |
| stm | 0.103 | calm1a | -0.042 |
| lrwd1 | 0.095 | marcksl1a | -0.041 |
| s100a1 | 0.095 | atp6v0cb | -0.040 |
| asb11 | 0.093 | rnasekb | -0.040 |
| si:ch211-152c2.3 | 0.093 | stmn1b | -0.040 |
| si:dkey-66i24.9 | 0.093 | si:ch1073-429i10.3.1 | -0.040 |
| add3b | 0.091 | gapdhs | -0.038 |
| nnr | 0.090 | gpm6ab | -0.038 |
| si:dkey-261m9.12 | 0.089 | ccni | -0.037 |
| si:dkey-228b2.6 | 0.086 | ckbb | -0.037 |
| hspb1 | 0.085 | elavl3 | -0.037 |
| ved | 0.085 | gng3 | -0.037 |
| tbx16 | 0.084 | hbbe1.3 | -0.036 |
| bmp7a | 0.083 | sncb | -0.036 |
| si:dkey-92i17.2 | 0.083 | atp6v1e1b | -0.035 |
| ing5b | 0.082 | atp6v1g1 | -0.035 |
| zgc:56699 | 0.082 | nova2 | -0.035 |
| fbl | 0.081 | vamp2 | -0.035 |
| LOC108190024 | 0.081 | hbae3 | -0.034 |
| si:ch211-173m16.2 | 0.081 | pvalb2 | -0.034 |
| vox | 0.080 | atpv0e2 | -0.033 |
| vrtn | 0.080 | fam168a | -0.033 |
| nop58 | 0.079 | pvalb1 | -0.033 |
| polr2gl | 0.079 | ywhag2 | -0.033 |
| bms1 | 0.078 | cspg5a | -0.032 |
| dkc1 | 0.078 | elavl4 | -0.032 |
| LOC100008030 | 0.078 | fabp3 | -0.032 |
| si:dkey-68o6.5 | 0.077 | fez1 | -0.032 |
| ddx4 | 0.076 | hbae1.1 | -0.032 |
| dnmt3bb.2 | 0.076 | snap25a | -0.032 |
| hnrnpa1b | 0.076 | stx1b | -0.032 |
| npm1a | 0.076 | wu:fb55g09 | -0.032 |