Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tlx3b | 0.301 | si:dkey-151g10.6 | -0.041 |
| nebl | 0.171 | hmgb2a | -0.037 |
| phox2bb | 0.144 | id1 | -0.034 |
| lmx1bb | 0.135 | pcna | -0.033 |
| eomesb | 0.122 | rpl5a | -0.033 |
| cbln12 | 0.118 | stmn1a | -0.033 |
| cacna2d4b | 0.118 | anp32b | -0.033 |
| neurod2 | 0.112 | rplp1 | -0.032 |
| CR812832.1 | 0.099 | ranbp1 | -0.032 |
| AL928866.2 | 0.098 | selenoh | -0.031 |
| si:dkeyp-74b6.2 | 0.093 | XLOC-003690 | -0.031 |
| tm6sf2 | 0.089 | snu13b | -0.031 |
| zic5 | 0.088 | her15.1 | -0.031 |
| slc17a7a | 0.088 | msna | -0.030 |
| gabra4 | 0.087 | mdka | -0.029 |
| neurod1 | 0.085 | sox3 | -0.029 |
| cspg5b | 0.083 | tuba8l4 | -0.029 |
| fat2 | 0.083 | si:ch73-281n10.2 | -0.029 |
| tlx2 | 0.081 | rpl7 | -0.029 |
| si:ch211-67f24.7 | 0.076 | nop58 | -0.029 |
| zic2a | 0.074 | rps15a | -0.028 |
| r3hdm1 | 0.072 | banf1 | -0.028 |
| zbtb7c | 0.072 | XLOC-003689 | -0.028 |
| raraa | 0.070 | rps24 | -0.028 |
| si:ch73-62l21.1 | 0.069 | rps12 | -0.028 |
| si:dkey-215k6.1 | 0.069 | ccnd1 | -0.028 |
| camk4 | 0.066 | chaf1a | -0.028 |
| pard6ga | 0.066 | sox19a | -0.027 |
| zbtb18 | 0.064 | rrm1 | -0.027 |
| draxin | 0.063 | dkc1 | -0.027 |
| zpld1a | 0.063 | tuba8l | -0.027 |
| kcnip1b | 0.062 | rps20 | -0.027 |
| ndrg3b | 0.059 | hmgb2b | -0.027 |
| cbln1 | 0.059 | XLOC-003692 | -0.026 |
| nfia | 0.058 | hmga1a | -0.026 |