Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| stmn1b | 0.074 | hmgb2a | -0.066 |
| tubb5 | 0.072 | id1 | -0.059 |
| rtn1b | 0.072 | pcna | -0.058 |
| tuba1c | 0.071 | stmn1a | -0.052 |
| gpm6ab | 0.070 | si:dkey-151g10.6 | -0.052 |
| gng3 | 0.069 | msna | -0.051 |
| rtn1a | 0.068 | selenoh | -0.050 |
| ywhah | 0.067 | ranbp1 | -0.050 |
| zc4h2 | 0.066 | mdka | -0.050 |
| elavl3 | 0.065 | si:ch73-281n10.2 | -0.050 |
| ckbb | 0.064 | XLOC-003690 | -0.048 |
| gpm6aa | 0.064 | sox3 | -0.048 |
| fez1 | 0.063 | ccnd1 | -0.047 |
| cd99l2 | 0.062 | chaf1a | -0.047 |
| kdm6bb | 0.061 | anp32b | -0.047 |
| elavl4 | 0.060 | banf1 | -0.047 |
| si:dkey-276j7.1 | 0.059 | tuba8l | -0.046 |
| hmgb3a | 0.059 | rrm1 | -0.046 |
| dpysl2b | 0.059 | dut | -0.046 |
| tmsb | 0.059 | mcm6 | -0.046 |
| tmeff1b | 0.058 | snu13b | -0.045 |
| id4 | 0.058 | sox19a | -0.045 |
| dbn1 | 0.057 | npm1a | -0.044 |
| sncb | 0.057 | nutf2l | -0.044 |
| ptmaa | 0.057 | fen1 | -0.044 |
| stmn2a | 0.057 | rpa3 | -0.044 |
| tmem59l | 0.057 | mki67 | -0.044 |
| stx1b | 0.056 | nop58 | -0.043 |
| nova2 | 0.056 | XLOC-003689 | -0.043 |
| nsg2 | 0.056 | cldn5a | -0.043 |
| adam22 | 0.056 | vamp3 | -0.043 |
| dpysl3 | 0.056 | zgc:56493 | -0.043 |
| atp6v0cb | 0.055 | nop56 | -0.043 |
| h2afx1 | 0.054 | her15.1 | -0.043 |
| gng2 | 0.054 | ccng1 | -0.043 |