Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| BX950865.1 | 0.138 | id1 | -0.055 |
| BX088688.3 | 0.111 | XLOC-003690 | -0.050 |
| BX005443.1 | 0.107 | cldn5a | -0.048 |
| BX323022.1 | 0.102 | her15.1 | -0.046 |
| XLOC-041081 | 0.095 | mdka | -0.045 |
| XLOC-031339 | 0.092 | sox3 | -0.042 |
| si:dkeyp-98a7.7 | 0.090 | sdc4 | -0.040 |
| fgf2 | 0.076 | notch3 | -0.040 |
| v2ra16 | 0.074 | XLOC-003689 | -0.039 |
| LO018238.1 | 0.073 | sparc | -0.039 |
| nsg2 | 0.072 | msna | -0.039 |
| myt1b | 0.070 | hmgb2a | -0.038 |
| ywhah | 0.066 | btg2 | -0.037 |
| elavl3 | 0.063 | ccng1 | -0.037 |
| ppfia3 | 0.062 | msi1 | -0.036 |
| ifit9 | 0.062 | her4.1 | -0.035 |
| lhx1a | 0.061 | fosab | -0.035 |
| tmeff1b | 0.060 | zgc:56493 | -0.035 |
| mab21l2 | 0.060 | vamp3 | -0.034 |
| stmn2b | 0.060 | sox19a | -0.034 |
| cnrip1a | 0.060 | si:ch211-286b5.5 | -0.034 |
| LOC110440040 | 0.059 | XLOC-003692 | -0.033 |
| hmgb3a | 0.059 | her12 | -0.033 |
| wt1a | 0.059 | COX7A2 (1 of many) | -0.033 |
| golga7ba | 0.059 | her4.2 | -0.033 |
| BX294181.2 | 0.059 | cd63 | -0.033 |
| lhx5 | 0.058 | ccnd1 | -0.033 |
| stx1b | 0.058 | sox2 | -0.032 |
| atcaya | 0.058 | anp32b | -0.032 |
| BX465205.1 | 0.058 | tuba8l | -0.032 |
| tmsb | 0.058 | tuba8l4 | -0.032 |
| gng2 | 0.058 | si:ch73-281n10.2 | -0.032 |
| gng3 | 0.057 | her2 | -0.032 |
| slc30a2 | 0.057 | cd82a | -0.032 |
| stmn1b | 0.057 | dut | -0.032 |