Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| BX957251.1 | 0.209 | calm1a | -0.037 |
| nnr | 0.158 | si:ch1073-429i10.3.1 | -0.036 |
| si:ch1073-80i24.3 | 0.158 | ccni | -0.035 |
| asb11 | 0.151 | gapdhs | -0.035 |
| pou5f3 | 0.140 | rnasekb | -0.035 |
| si:ch211-173m16.2 | 0.133 | atp6v0cb | -0.034 |
| si:dkeyp-114g9.1 | 0.128 | tuba1c | -0.034 |
| polr3gla | 0.127 | gpm6aa | -0.033 |
| si:dkey-228b2.6 | 0.127 | rtn1a | -0.033 |
| si:dkey-68o6.5 | 0.126 | hbbe1.3 | -0.032 |
| nanog | 0.122 | hbae3 | -0.031 |
| h1m | 0.121 | atp6v1e1b | -0.030 |
| zgc:56699 | 0.120 | atp6v1g1 | -0.030 |
| lrwd1 | 0.118 | gng3 | -0.030 |
| s100a1 | 0.112 | gpm6ab | -0.030 |
| si:ch73-160h15.3 | 0.110 | stmn1b | -0.030 |
| avd | 0.109 | hbae1.1 | -0.029 |
| foxh1 | 0.109 | krt4 | -0.029 |
| LOC101885477 | 0.109 | nova2 | -0.029 |
| LOC108190024 | 0.107 | pvalb1 | -0.029 |
| ccna1 | 0.105 | vamp2 | -0.029 |
| zgc:173742 | 0.105 | cyt1 | -0.028 |
| cldnd | 0.104 | pvalb2 | -0.028 |
| mcm6l | 0.104 | sncb | -0.028 |
| stm | 0.103 | wu:fb55g09 | -0.028 |
| zgc:77118 | 0.100 | marcksl1a | -0.028 |
| tbx16 | 0.099 | atp6ap2 | -0.027 |
| foxd5 | 0.098 | atpv0e2 | -0.027 |
| vrtn | 0.096 | elavl3 | -0.027 |
| zgc:100951 | 0.095 | hbbe1.1 | -0.027 |
| BX005461.1 | 0.094 | stx1b | -0.027 |
| ddx4 | 0.094 | ywhag2 | -0.027 |
| eif4e1b | 0.094 | elavl4 | -0.026 |
| add3b | 0.093 | fam168a | -0.026 |
| BX530721.1 | 0.093 | gabarapl2 | -0.026 |