Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| cart1 | 0.402 | hmgb2a | -0.030 |
| gnrh2 | 0.278 | si:dkey-151g10.6 | -0.027 |
| chst8 | 0.145 | hmgb2b | -0.027 |
| cart2 | 0.115 | hmga1a | -0.024 |
| alkal2a | 0.107 | id1 | -0.023 |
| tmem119a | 0.074 | stmn1a | -0.023 |
| mtnr1ba | 0.067 | rpl7a | -0.023 |
| pou4f1 | 0.063 | rplp1 | -0.022 |
| gpx3 | 0.059 | mdka | -0.022 |
| foxa2 | 0.051 | snrpb | -0.022 |
| si:dkey-19a16.1 | 0.050 | XLOC-003690 | -0.022 |
| LOC110440051 | 0.049 | pcna | -0.022 |
| XLOC-000910 | 0.046 | rplp0 | -0.022 |
| grik1b | 0.044 | sox3 | -0.021 |
| hcrtr2 | 0.044 | ranbp1 | -0.021 |
| stmn2a | 0.044 | mcm7 | -0.021 |
| gap43 | 0.043 | cx43.4 | -0.021 |
| BX465849.1 | 0.042 | banf1 | -0.021 |
| LOC100002266.1 | 0.042 | her15.1 | -0.021 |
| slc17a6b | 0.041 | nop56 | -0.021 |
| islr2 | 0.041 | tuba8l | -0.021 |
| irx4a | 0.039 | msna | -0.021 |
| elavl4 | 0.039 | anp32b | -0.021 |
| scg2b | 0.039 | rrm1 | -0.020 |
| gpm6ab | 0.037 | snu13b | -0.020 |
| sncb | 0.037 | sox19a | -0.020 |
| irf5 | 0.037 | mki67 | -0.020 |
| zgc:65894 | 0.037 | h2afvb | -0.020 |
| spock3 | 0.037 | rps12 | -0.020 |
| tmsb2 | 0.036 | XLOC-003689 | -0.020 |
| rtn1b | 0.035 | rpl8 | -0.020 |
| LAMP5 | 0.035 | chaf1a | -0.020 |
| mllt11 | 0.035 | rpl10a | -0.020 |
| scg2a | 0.035 | si:ch73-281n10.2 | -0.020 |
| AL935145.1 | 0.035 | eef1a1l1 | -0.019 |