| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| bnc2 | 0.105 | XLOC-003690 | -0.042 |
| lef1 | 0.097 | her15.1 | -0.042 |
| zgc:158291 | 0.091 | sox3 | -0.041 |
| pou4f2 | 0.081 | XLOC-003689 | -0.039 |
| tfap2d | 0.081 | sox19a | -0.037 |
| islr2 | 0.075 | XLOC-003692 | -0.037 |
| isl2a | 0.075 | cldn5a | -0.036 |
| pou4f1 | 0.073 | abhd6a | -0.035 |
| shox | 0.071 | hmgb2a | -0.034 |
| pou4f3 | 0.071 | her4.2 | -0.034 |
| lmo3 | 0.070 | pcna | -0.034 |
| barhl2 | 0.064 | msi1 | -0.033 |
| olfm3a | 0.064 | mdka | -0.032 |
| arhgdig | 0.063 | her2 | -0.031 |
| mcama | 0.063 | dla | -0.031 |
| runx3 | 0.060 | dut | -0.030 |
| htr3b | 0.059 | her4.1 | -0.030 |
| lhx9 | 0.058 | hes6 | -0.030 |
| mab21l1 | 0.057 | sb:cb81 | -0.029 |
| myo9bl | 0.055 | lfng | -0.029 |
| si:ch211-181l5.2 | 0.055 | notch3 | -0.029 |
| htr3a | 0.052 | mcm7 | -0.028 |
| xpr1a | 0.052 | msna | -0.028 |
| robo1 | 0.051 | cdca7b | -0.028 |
| ebf3a | 0.051 | si:ch73-21g5.7 | -0.028 |
| barhl1a | 0.051 | rrm1 | -0.028 |
| LOC100537342 | 0.051 | gfap | -0.027 |
| ntng2a | 0.050 | selenoh | -0.027 |
| ldb2b | 0.049 | si:ch211-212k18.5 | -0.027 |
| tcf7l2 | 0.048 | efnb3b | -0.027 |
| kif26bb | 0.048 | COX7A2 (1 of many) | -0.027 |
| ywhaz | 0.047 | gpm6bb | -0.027 |
| fermt1 | 0.046 | slbp | -0.027 |
| gng3 | 0.046 | ccnd1 | -0.027 |
| NPAS3 | 0.045 | chaf1a | -0.027 |