Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| si:ch211-157b11.8 | 0.358 | ptmaa | -0.034 |
| twist2 | 0.318 | fabp3 | -0.034 |
| ptx3a | 0.309 | tuba1c | -0.034 |
| matn3b | 0.273 | gpm6aa | -0.029 |
| kng1 | 0.264 | nme2b.1 | -0.028 |
| tmem119a | 0.258 | nova2 | -0.028 |
| spon2a | 0.243 | ptmab | -0.027 |
| timp4.1 | 0.239 | prdx2 | -0.024 |
| pgfb | 0.223 | si:dkey-56m19.5 | -0.023 |
| angpt1 | 0.217 | mdkb | -0.023 |
| insb | 0.208 | si:ch211-137a8.4 | -0.022 |
| LOC101883693 | 0.205 | ckbb | -0.021 |
| ism2a | 0.202 | sox3 | -0.021 |
| myo1f | 0.197 | zgc:165461 | -0.021 |
| pappaa | 0.185 | rtn1a | -0.021 |
| fhl2a | 0.180 | CU467822.1 | -0.020 |
| ntd5 | 0.177 | cspg5a | -0.020 |
| LOC110440119 | 0.176 | sox19a | -0.020 |
| rspo3 | 0.172 | wasf3b | -0.020 |
| optc | 0.171 | hmgb1b | -0.020 |
| aff3 | 0.160 | hnrnpa0b | -0.020 |
| col8a1a | 0.160 | fabp7a | -0.020 |
| cdc42ep3 | 0.156 | apex1 | -0.019 |
| frem3 | 0.154 | tuba1a | -0.019 |
| slc6a4a | 0.154 | lfng | -0.019 |
| col9a1b | 0.153 | elavl3 | -0.019 |
| hapln1b | 0.153 | chd4a | -0.019 |
| si:ch211-246m6.5 | 0.153 | hmgb1a | -0.019 |
| LOC101885645 | 0.152 | hnrnpabb | -0.018 |
| fbln2 | 0.151 | abhd6a | -0.018 |
| colec12 | 0.151 | stmn1a | -0.018 |
| pros1 | 0.151 | nkain1 | -0.018 |
| tmem119b | 0.150 | her4.2 | -0.017 |
| rbp7b | 0.149 | srsf11 | -0.017 |
| fgfrl1b | 0.147 | msi1 | -0.017 |