Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nitr7b | 0.101 | rarga | -0.038 |
| col8a1a | 0.098 | col9a1a | -0.036 |
| vwde | 0.091 | sod1 | -0.036 |
| LOC100002283 | 0.091 | mab21l2 | -0.033 |
| CR854926.1 | 0.091 | col9a2 | -0.033 |
| fstl1a | 0.090 | col2a1a | -0.032 |
| si:ch211-241j12.4 | 0.090 | six1a | -0.031 |
| LOC110439832 | 0.089 | cdh11 | -0.030 |
| or119-2 | 0.086 | ecrg4a | -0.028 |
| nkx3-1 | 0.083 | rbp4 | -0.028 |
| en1a | 0.083 | cnmd | -0.028 |
| itga4 | 0.079 | fibina | -0.028 |
| camkk1b | 0.076 | ppdpfb | -0.026 |
| ccdc3a | 0.076 | col11a2 | -0.026 |
| lamb2 | 0.076 | sfrp2 | -0.025 |
| pax1a | 0.074 | ckbb | -0.025 |
| BNC1 | 0.073 | pvalb1 | -0.025 |
| FO834800.2 | 0.071 | cox4i2 | -0.025 |
| XLOC-035844 | 0.070 | nck1a | -0.025 |
| pi15a | 0.070 | mdh2 | -0.025 |
| smoc1 | 0.070 | dlx5a | -0.025 |
| shisa2a | 0.068 | six2a | -0.025 |
| XLOC-040495 | 0.067 | slc3a2b | -0.024 |
| col7a1l | 0.066 | gsc | -0.024 |
| XLOC-042222 | 0.066 | ptmaa | -0.024 |
| si:ch211-43f4.1 | 0.066 | fxyd1 | -0.024 |
| fbln7 | 0.066 | barx1 | -0.024 |
| LOC110438441 | 0.065 | ndufb9 | -0.024 |
| carm1l | 0.064 | eya1 | -0.024 |
| XLOC-032129 | 0.064 | rplp2 | -0.023 |
| LOC103910718 | 0.064 | VIT | -0.023 |
| en1b | 0.063 | eif4a1b | -0.023 |
| XLOC-004681 | 0.063 | pvalb2 | -0.023 |
| XLOC-009787 | 0.063 | chd3 | -0.023 |
| LOC110438394 | 0.062 | foxc1b | -0.022 |