Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| cdx1a | 0.087 | rps10 | -0.047 |
| cdx4 | 0.086 | rpl37 | -0.046 |
| si:dkey-175m17.6 | 0.083 | zgc:114188 | -0.045 |
| XLOC-004280 | 0.073 | h3f3a | -0.041 |
| CABZ01002809.1 | 0.073 | ptmaa | -0.037 |
| sp5l | 0.071 | hnrnpa0l | -0.037 |
| BX000701.2 | 0.066 | tmsb4x | -0.035 |
| BX927327.1 | 0.065 | rps17 | -0.033 |
| nradd | 0.063 | marcksl1a | -0.032 |
| mir92a-2 | 0.061 | fabp3 | -0.032 |
| apela | 0.061 | ppiab | -0.030 |
| chrd | 0.060 | CR383676.1 | -0.029 |
| CABZ01060491.1 | 0.060 | nme2b.1 | -0.027 |
| si:ch211-152c2.3 | 0.059 | tuba1c | -0.027 |
| hspb1 | 0.058 | cct2 | -0.025 |
| ca9 | 0.055 | si:ch1073-429i10.3.1 | -0.025 |
| hnf1ba | 0.055 | h3f3c | -0.024 |
| foxd5 | 0.055 | mt-nd1 | -0.022 |
| apoc1 | 0.054 | ppdpfb | -0.022 |
| BX927258.1 | 0.053 | rtn1a | -0.021 |
| stm | 0.053 | eef1b2 | -0.021 |
| NC-002333.4 | 0.052 | zgc:56493 | -0.021 |
| apoeb | 0.052 | eef1g | -0.021 |
| cxcr4a | 0.052 | actc1b | -0.021 |
| si:dkey-261m9.12 | 0.051 | elavl3 | -0.021 |
| hoxb1b | 0.050 | wu:fb55g09 | -0.021 |
| LOC100008030 | 0.050 | gpm6aa | -0.020 |
| BX005027.2 | 0.050 | mt-atp6 | -0.020 |
| XLOC-033951 | 0.049 | rpl19 | -0.020 |
| zgc:174354 | 0.048 | stmn1b | -0.020 |
| crabp2b | 0.048 | tmsb | -0.020 |
| prickle1a | 0.048 | zgc:158463 | -0.020 |
| vox | 0.047 | mbd3b | -0.019 |
| dnmt3bb.2 | 0.047 | faua | -0.019 |
| XLOC-000597 | 0.046 | vdac3 | -0.018 |