| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nanog | 0.224 | si:ch73-1a9.3 | -0.175 |
| cldnd | 0.215 | si:ch211-222l21.1 | -0.170 |
| h1m | 0.207 | eef1a1l1 | -0.164 |
| acp5a | 0.206 | hnrnpa0b | -0.162 |
| ccna1 | 0.204 | hmgb2a | -0.159 |
| spink2.1 | 0.204 | hmga1a | -0.153 |
| h2af1al | 0.201 | NC-002333.4 | -0.152 |
| mkrn4 | 0.198 | si:ch211-152c2.3 | -0.145 |
| zgc:173742 | 0.193 | hspb1 | -0.141 |
| blf | 0.192 | dynll1 | -0.140 |
| dctpp1 | 0.185 | anp32e | -0.137 |
| npc2 | 0.183 | polr3gla | -0.135 |
| zgc:56676 | 0.182 | rplp1 | -0.133 |
| gtf2a1 | 0.182 | marcksl1b | -0.132 |
| dnajc1 | 0.181 | ybx1 | -0.131 |
| zgc:113424 | 0.180 | add3b | -0.129 |
| rcor1 | 0.180 | stm | -0.127 |
| rbm7 | 0.176 | ptmab | -0.126 |
| ccnb2 | 0.175 | npm1a | -0.124 |
| zgc:100951 | 0.173 | rps13 | -0.123 |
| lamp2 | 0.171 | nop2 | -0.122 |
| ccna2 | 0.168 | rps7 | -0.120 |
| zgc:77118 | 0.167 | apoc1 | -0.120 |
| glulb | 0.165 | si:dkey-151g10.6 | -0.119 |
| slc16a3 | 0.165 | rps19 | -0.115 |
| pabpn1l | 0.165 | hmgn6 | -0.114 |
| tent5c | 0.165 | hmgn2 | -0.111 |
| pfn2 | 0.164 | sox2 | -0.110 |
| si:ch73-299h12.2 | 0.163 | rpl11 | -0.110 |
| cldng | 0.163 | si:ch211-137a8.4 | -0.109 |
| mid1ip1l | 0.162 | nucks1a | -0.108 |
| gdf3 | 0.162 | mt-co1 | -0.108 |
| si:dkey-68o6.5 | 0.161 | hspe1 | -0.108 |
| si:ch211-132b12.8 | 0.159 | gnl3 | -0.108 |
| cited4b | 0.159 | rpl27 | -0.107 |