Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| vipr1b | 0.699 | six1b | -0.105 |
| col21a1 | 0.604 | si:dkey-222f2.1 | -0.098 |
| ppfibp2a | 0.575 | eya1 | -0.088 |
| ca12 | 0.558 | snrpf | -0.065 |
| si:ch211-246m6.5 | 0.548 | snrpd1 | -0.064 |
| LOC108181560 | 0.531 | hmgn3 | -0.063 |
| plekho1a | 0.518 | hmga1a | -0.062 |
| CABZ01072077.1 | 0.510 | lsm6 | -0.061 |
| cldn7a | 0.495 | ptges3b | -0.060 |
| angptl2b | 0.491 | eef1db | -0.060 |
| spon1b | 0.488 | snrpb | -0.060 |
| avpr2ab | 0.448 | fabp3 | -0.060 |
| foxi1 | 0.443 | her15.1 | -0.059 |
| CR407547.1 | 0.437 | si:ch211-152c2.3 | -0.058 |
| cntn3a.1 | 0.426 | sub1a | -0.057 |
| avpr1ab | 0.414 | rps17 | -0.055 |
| gpha2 | 0.406 | snrpd2 | -0.055 |
| thbs3b | 0.404 | magoh | -0.055 |
| tgfb2l | 0.401 | nop10 | -0.054 |
| cped1 | 0.398 | snrpg | -0.054 |
| cx43 | 0.386 | ppiab | -0.054 |
| wnt9b | 0.384 | zgc:56493 | -0.054 |
| emilin2a | 0.375 | marcksb | -0.054 |
| FQ311924.2 | 0.370 | apex1 | -0.052 |
| smtnb | 0.369 | dad1 | -0.052 |
| XLOC-034149 | 0.369 | ddost | -0.051 |
| hbegfb | 0.367 | ddx39ab | -0.051 |
| wnt16 | 0.356 | srsf3b | -0.051 |
| adra1d | 0.354 | cirbpa | -0.051 |
| entpd5a | 0.350 | snrpe | -0.050 |
| ednrba | 0.343 | rplp2l | -0.050 |
| megf6a | 0.338 | pomp | -0.050 |
| si:ch211-233h19.2 | 0.328 | clta | -0.050 |
| CU929240.1 | 0.326 | snu13b | -0.050 |
| cort | 0.314 | sox2 | -0.049 |