Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| slc32a1 | 0.226 | id1 | -0.088 |
| slc6a5 | 0.196 | XLOC-003690 | -0.087 |
| cplx2l | 0.174 | si:dkey-151g10.6 | -0.082 |
| scg2a | 0.167 | mdka | -0.080 |
| stx1b | 0.165 | rplp1 | -0.075 |
| stxbp1a | 0.165 | hmgb2a | -0.075 |
| sypb | 0.164 | notch3 | -0.074 |
| gad1b | 0.163 | cldn5a | -0.073 |
| pkd2l1 | 0.162 | her15.1 | -0.073 |
| atp6v0cb | 0.162 | sparc | -0.070 |
| pkd1l2a | 0.160 | sox3 | -0.069 |
| cacna2d3 | 0.157 | rps20 | -0.067 |
| sncgb | 0.156 | XLOC-003689 | -0.067 |
| snap25a | 0.153 | rps19 | -0.066 |
| spock1 | 0.149 | fabp7a | -0.064 |
| atp1a3b | 0.149 | msi1 | -0.064 |
| znf385c | 0.149 | COX7A2 (1 of many) | -0.063 |
| syt2a | 0.146 | sdc4 | -0.063 |
| atpv0e2 | 0.146 | rpl23 | -0.062 |
| nrxn3b | 0.145 | vamp3 | -0.062 |
| vamp2 | 0.145 | rps15a | -0.062 |
| nrxn3a | 0.144 | si:dkey-42i9.4 | -0.062 |
| sncb | 0.144 | gpm6bb | -0.060 |
| nptna | 0.142 | marcksl1a | -0.060 |
| egr4 | 0.141 | cd82a | -0.060 |
| urp1 | 0.140 | sox19a | -0.059 |
| cpe | 0.138 | her4.1 | -0.058 |
| sh3gl2a | 0.138 | sb:cb81 | -0.058 |
| eno2 | 0.138 | ran | -0.058 |
| pcsk1nl | 0.137 | hmgb2b | -0.058 |
| si:ch1073-70f20.1 | 0.137 | XLOC-003692 | -0.058 |
| si:dkey-175g6.2 | 0.136 | her4.2 | -0.058 |
| ywhag2 | 0.136 | rpl30 | -0.057 |
| sv2a | 0.135 | gfap | -0.057 |
| sypa | 0.135 | atp1a1b | -0.057 |