Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| BX005417.2 | 0.808 | cox7c | -0.043 |
| st8sia3 | 0.808 | ppp2cb | -0.043 |
| LOC100333031 | 0.696 | cnbpa | -0.042 |
| LOC110439619 | 0.681 | c1qbp | -0.035 |
| dcc | 0.546 | psma4 | -0.035 |
| atoh1b | 0.503 | eef1db | -0.035 |
| onecutl | 0.485 | hmgb1a | -0.032 |
| cryba2b | 0.459 | cnbpb | -0.032 |
| LOC108183933 | 0.440 | mrpl33 | -0.031 |
| xylb | 0.366 | rnf7 | -0.031 |
| cldn20 | 0.362 | si:ch73-281n10.2 | -0.030 |
| olig4 | 0.349 | hypk | -0.030 |
| sema6ba | 0.348 | pdia3 | -0.030 |
| pcdh1gb2 | 0.334 | cox5aa | -0.030 |
| cyp26c1 | 0.332 | dpy30 | -0.030 |
| cyp46a1.1 | 0.328 | hspe1 | -0.029 |
| cntnap2b | 0.312 | mrpl54 | -0.029 |
| proca1 | 0.304 | csde1 | -0.029 |
| ampd2b | 0.302 | pa2g4b | -0.029 |
| gucy2f | 0.297 | ndufa6 | -0.029 |
| ebf2 | 0.288 | magt1 | -0.028 |
| nhlh2 | 0.285 | clptm1 | -0.028 |
| vgf | 0.278 | eci1 | -0.028 |
| si:dkeyp-34c12.1 | 0.274 | snu13b | -0.028 |
| cryaba | 0.266 | u2af2b | -0.027 |
| LOC101884506 | 0.258 | pax2a | -0.027 |
| si:dkey-146c18.2 | 0.255 | golga7 | -0.027 |
| si:dkey-23a13.5 | 0.246 | tomm6 | -0.027 |
| lrp2b | 0.237 | paip2b | -0.027 |
| gpr88 | 0.235 | polr2eb | -0.027 |
| pgbd5 | 0.229 | cox6c | -0.027 |
| ptpn23b | 0.229 | pfdn4 | -0.027 |
| nrn1a | 0.226 | pno1 | -0.027 |
| si:ch211-253h3.1 | 0.223 | pfn2l | -0.027 |
| susd5 | 0.221 | hadh | -0.027 |