Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| si:ch211-157b11.8 | 0.227 | ckbb | -0.034 |
| matn3b | 0.179 | ptmaa | -0.034 |
| hbba1 | 0.159 | gpm6aa | -0.032 |
| spon2a | 0.151 | mdkb | -0.028 |
| ntd5 | 0.137 | hmgb1a | -0.028 |
| LOC100329885 | 0.134 | fabp7a | -0.028 |
| timp4.1 | 0.132 | mt-atp6 | -0.026 |
| pgfb | 0.131 | nova2 | -0.026 |
| optc | 0.129 | rtn1a | -0.025 |
| CU694525.1 | 0.127 | CU467822.1 | -0.025 |
| BX465857.1 | 0.122 | tuba1c | -0.025 |
| kng1 | 0.118 | mt-nd1 | -0.024 |
| angpt1 | 0.115 | COX3 | -0.023 |
| col8a1a | 0.113 | zgc:158463 | -0.023 |
| gdf6a | 0.111 | pvalb2 | -0.023 |
| ism2a | 0.109 | pvalb1 | -0.023 |
| ptx3a | 0.109 | elavl4 | -0.022 |
| aff3 | 0.107 | stmn1b | -0.021 |
| frem3 | 0.104 | slc1a2b | -0.021 |
| XLOC-032110 | 0.103 | hmgb1b | -0.021 |
| fbln2 | 0.103 | gpm6ab | -0.021 |
| anxa4 | 0.103 | rtn1b | -0.020 |
| si:ch211-120e1.7 | 0.100 | gapdhs | -0.020 |
| col11a2 | 0.098 | snap25a | -0.020 |
| BX890600.1 | 0.097 | sncb | -0.020 |
| serpinh1b | 0.097 | fez1 | -0.020 |
| aplnr2 | 0.095 | cspg5a | -0.019 |
| tmem154 | 0.095 | dpysl3 | -0.019 |
| rspo3 | 0.094 | actc1b | -0.019 |
| palm3 | 0.094 | vat1 | -0.019 |
| LOC103910193 | 0.093 | si:ch211-251b21.1 | -0.019 |
| twist2 | 0.092 | stmn2a | -0.019 |
| BX649628.1 | 0.092 | nova1 | -0.019 |
| BX927130.2 | 0.091 | pbx3b | -0.019 |
| cers3b | 0.091 | ndrg3a | -0.018 |