Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| col1a1b | 0.126 | snrpf | -0.104 |
| col1a1a | 0.125 | hmgn6 | -0.099 |
| col4a5 | 0.123 | h3f3d | -0.096 |
| col1a2 | 0.122 | snrpb | -0.095 |
| itgav | 0.121 | ddx39ab | -0.094 |
| rbp4 | 0.120 | ptges3b | -0.093 |
| col4a6 | 0.118 | hmga1a | -0.093 |
| krt91 | 0.116 | snrpd1 | -0.092 |
| col14a1b | 0.114 | snrpe | -0.091 |
| LOC110437898 | 0.113 | hnrnpaba | -0.090 |
| aqp3a | 0.113 | snrpd2 | -0.090 |
| col11a1a | 0.112 | khdrbs1a | -0.090 |
| sparc | 0.112 | snrpg | -0.087 |
| lamb4 | 0.111 | alyref | -0.087 |
| si:dkey-33c14.3 | 0.110 | h2afva | -0.087 |
| krt5 | 0.110 | ilf2 | -0.086 |
| epgn | 0.107 | apex1 | -0.086 |
| krtt1c19e | 0.106 | hnrnpa0l | -0.085 |
| LOC108179803 | 0.106 | krt18a.1 | -0.083 |
| plecb | 0.106 | hmgb2b | -0.083 |
| postnb | 0.104 | rbm8a | -0.083 |
| itgb4 | 0.104 | h2afvb | -0.081 |
| col2a1b | 0.104 | snu13b | -0.081 |
| DSG2 | 0.102 | rpl12 | -0.080 |
| ak1 | 0.101 | hmgn2 | -0.079 |
| cotl1 | 0.101 | sub1a | -0.079 |
| col5a1 | 0.099 | nono | -0.079 |
| si:dkey-262k9.2 | 0.098 | rps23 | -0.079 |
| col17a1a | 0.098 | hnrnpa0b | -0.079 |
| cavin1b | 0.096 | ssr3 | -0.078 |
| cxl34b.11 | 0.096 | si:ch73-281n10.2 | -0.078 |
| wu:fa03e10 | 0.096 | lsm7 | -0.078 |
| anxa1a | 0.095 | cbx3a | -0.078 |
| col16a1 | 0.095 | setb | -0.078 |
| itm2bb | 0.094 | srsf3b | -0.078 |