Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| gfi1b | 0.507 | col1a2 | -0.082 |
| pou2f3 | 0.439 | s100a10b | -0.081 |
| myb | 0.430 | cldn1 | -0.081 |
| sox4a | 0.253 | sparc | -0.078 |
| sox4b | 0.234 | col1a1a | -0.075 |
| foxi3a | 0.228 | col1a1b | -0.075 |
| ascl1a | 0.227 | gapdhs | -0.074 |
| myclb | 0.216 | anxa1a | -0.074 |
| lfng | 0.199 | postnb | -0.073 |
| olfml1 | 0.189 | aqp3a | -0.072 |
| tnfrsf11a | 0.188 | tmsb4x | -0.069 |
| rbm38 | 0.185 | rbp4 | -0.068 |
| LOC101885606 | 0.177 | col11a1a | -0.066 |
| cited1 | 0.176 | cotl1 | -0.066 |
| vent | 0.175 | cxl34b.11 | -0.066 |
| id2b | 0.174 | hbegfa | -0.065 |
| znfl2a | 0.171 | itgb4 | -0.064 |
| si:dkey-61f9.1 | 0.167 | krt5 | -0.064 |
| grhl1 | 0.163 | epgn | -0.064 |
| ca7 | 0.156 | plecb | -0.064 |
| ccnd1 | 0.153 | capns1a | -0.064 |
| lgals9l4 | 0.153 | capgb | -0.063 |
| si:ch211-213d14.2 | 0.152 | si:dkey-16p21.8 | -0.062 |
| FO904970.1 | 0.152 | krt91 | -0.061 |
| zbtb2b | 0.152 | arpc5b | -0.061 |
| gadd45aa | 0.152 | col14a1b | -0.061 |
| inka1b | 0.150 | tob1b | -0.060 |
| SPDEF | 0.150 | itgb1b.1 | -0.059 |
| alcamb | 0.146 | cdo1 | -0.059 |
| mir375-2 | 0.145 | zgc:86896 | -0.058 |
| ulk1a | 0.143 | krtt1c19e | -0.058 |
| fam84a | 0.142 | cfl1l | -0.057 |
| fn1a | 0.141 | zgc:136930 | -0.057 |
| otx2b | 0.140 | col2a1b | -0.055 |
| alox5ap | 0.139 | zgc:153284 | -0.055 |