Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| gfi1b | 0.425 | marcksb | -0.077 |
| gata1a | 0.362 | hmgb1b | -0.075 |
| epb41b | 0.344 | nucks1a | -0.075 |
| alas2 | 0.324 | si:ch211-288g17.3 | -0.075 |
| zgc:163057 | 0.323 | si:dkey-56m19.5 | -0.074 |
| slc4a1a | 0.322 | hmgb3a | -0.071 |
| hdr | 0.318 | pfn2l | -0.068 |
| nmt1b | 0.317 | jpt1b | -0.066 |
| tfr1a | 0.309 | si:ch211-137a8.4 | -0.066 |
| rfesd | 0.307 | si:ch73-46j18.5 | -0.066 |
| urod | 0.307 | hnrnpa0a | -0.065 |
| susd1 | 0.295 | tuba1c | -0.065 |
| klf1 | 0.294 | nova2 | -0.064 |
| hemgn | 0.279 | hp1bp3 | -0.063 |
| si:dkey-261j4.4 | 0.278 | acin1a | -0.061 |
| hbae5 | 0.276 | si:dkey-276j7.1 | -0.060 |
| hbae1.3 | 0.273 | zc4h2 | -0.060 |
| hbbe3 | 0.267 | gpm6aa | -0.059 |
| hbbe2 | 0.265 | tuba1a | -0.059 |
| blvrb | 0.264 | marcksl1a | -0.059 |
| hmbsb | 0.263 | fxyd6l | -0.058 |
| nt5c2l1 | 0.261 | vdac3 | -0.058 |
| tubb1 | 0.260 | mdkb | -0.056 |
| hbae1.1 | 0.255 | rtn1a | -0.056 |
| cahz | 0.253 | hnrnpa1a | -0.055 |
| fech | 0.252 | hnrnpub | -0.055 |
| si:ch211-227m13.1 | 0.249 | ilf3b | -0.055 |
| si:dkey-93h22.7 | 0.247 | ckbb | -0.054 |
| gp1bb | 0.245 | gnb1b | -0.054 |
| hbbe1.2 | 0.245 | si:ch211-133n4.4 | -0.054 |
| rhd | 0.245 | atrx | -0.053 |
| si:ch73-248e21.7 | 0.241 | srsf3b | -0.053 |
| hbbe1.1 | 0.239 | cx43.4 | -0.052 |
| hbae3 | 0.237 | fscn1a | -0.052 |
| sptb | 0.237 | pbx4 | -0.052 |