Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pou5f3 | 0.093 | calm1a | -0.032 |
| polr3gla | 0.083 | si:ch1073-429i10.3.1 | -0.032 |
| asb11 | 0.082 | rnasekb | -0.031 |
| nnr | 0.082 | tuba1c | -0.031 |
| si:ch1073-80i24.3 | 0.082 | ccni | -0.030 |
| stm | 0.079 | gapdhs | -0.030 |
| lrwd1 | 0.078 | gpm6aa | -0.030 |
| tbx16 | 0.076 | rtn1a | -0.030 |
| s100a1 | 0.075 | atp6v0cb | -0.029 |
| si:dkey-228b2.6 | 0.074 | hbbe1.3 | -0.028 |
| zgc:56699 | 0.073 | stmn1b | -0.028 |
| LOC100008030 | 0.072 | marcksl1a | -0.028 |
| si:ch211-152c2.3 | 0.071 | atp6v1e1b | -0.027 |
| si:dkey-66i24.9 | 0.071 | gng3 | -0.027 |
| si:dkey-92i17.2 | 0.071 | hbae3 | -0.027 |
| add3b | 0.070 | pvalb1 | -0.027 |
| ved | 0.070 | atp6v1g1 | -0.026 |
| BX530721.1 | 0.068 | elavl3 | -0.026 |
| vrtn | 0.068 | gpm6ab | -0.026 |
| hspb1 | 0.066 | ckbb | -0.025 |
| vox | 0.066 | hbae1.1 | -0.025 |
| ddx4 | 0.065 | pvalb2 | -0.025 |
| fbl | 0.064 | sncb | -0.025 |
| si:ch211-226h8.14 | 0.064 | vamp2 | -0.025 |
| si:dkeyp-114g9.1 | 0.064 | elavl4 | -0.024 |
| h1m | 0.063 | ywhag2 | -0.024 |
| si:ch211-173m16.2 | 0.063 | atpv0e2 | -0.023 |
| dkc1 | 0.062 | fam168a | -0.023 |
| hnrnpa1b | 0.062 | gabarapl2 | -0.023 |
| si:dkey-68o6.5 | 0.062 | hbbe1.1 | -0.023 |
| foxd5 | 0.061 | nova2 | -0.023 |
| nop58 | 0.061 | olfm1b | -0.023 |
| zic2b | 0.061 | si:dkeyp-75h12.5 | -0.023 |
| akap12b | 0.060 | snap25a | -0.023 |
| avd | 0.060 | stx1b | -0.023 |