Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| LOC110438298 | 0.169 | marcksl1a | -0.047 |
| wisp3 | 0.143 | mfap2 | -0.043 |
| LOC103908846 | 0.141 | tmsb4x | -0.042 |
| matn1 | 0.125 | si:ch211-222l21.1 | -0.041 |
| snorc | 0.122 | col1a2 | -0.037 |
| BX004996.1 | 0.121 | hspa8 | -0.037 |
| tnxba | 0.121 | hmgn6 | -0.036 |
| pcolceb | 0.120 | pmp22a | -0.034 |
| pimr110 | 0.119 | h3f3a | -0.033 |
| mia | 0.119 | col5a1 | -0.033 |
| ptgdsa | 0.109 | hsp90ab1 | -0.033 |
| CLEC3A | 0.107 | ptmab | -0.033 |
| hapln1b | 0.107 | ran | -0.032 |
| ucmab | 0.107 | fxyd6l | -0.032 |
| epyc | 0.106 | hmgn2 | -0.032 |
| si:ch211-156l18.4 | 0.104 | col1a1a | -0.032 |
| meltf | 0.103 | hmga1a | -0.032 |
| acana | 0.102 | actb1 | -0.032 |
| gldn | 0.102 | hmgb2b | -0.031 |
| col11a2 | 0.101 | marcksl1b | -0.030 |
| ddx4 | 0.100 | hmgb2a | -0.028 |
| cthrc1b | 0.099 | fstl1b | -0.027 |
| csgalnact1a | 0.099 | dcn | -0.027 |
| acanb | 0.098 | krt18b | -0.027 |
| si:dkey-262k9.2 | 0.097 | fabp3 | -0.026 |
| prss35 | 0.097 | rbp5 | -0.026 |
| CYTL1 | 0.094 | fthl27 | -0.026 |
| LOC100330861 | 0.094 | postnb | -0.026 |
| zgc:153681 | 0.093 | twist1a | -0.026 |
| zgc:194252 | 0.093 | tmem119b | -0.026 |
| si:ch211-106h11.3 | 0.092 | colec12 | -0.026 |
| col11a1a | 0.090 | h2afvb | -0.025 |
| otos | 0.089 | her6 | -0.025 |
| itih1 | 0.089 | actb2 | -0.025 |
| piwil2 | 0.088 | mdka | -0.025 |