Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| capn12 | 0.197 | eef1a1l1 | -0.117 |
| col1a1a | 0.180 | khdrbs1a | -0.101 |
| col1a1b | 0.178 | cirbpb | -0.099 |
| col11a1a | 0.171 | cct3 | -0.096 |
| col1a2 | 0.170 | ran | -0.096 |
| postnb | 0.163 | hsp90ab1 | -0.095 |
| col2a1b | 0.162 | snrpd1 | -0.095 |
| col14a1b | 0.158 | rps13 | -0.094 |
| krt5 | 0.155 | apex1 | -0.093 |
| itgav | 0.154 | h3f3d | -0.093 |
| sparc | 0.151 | rpl7a | -0.092 |
| krtt1c19e | 0.151 | snrpb | -0.092 |
| itgb4 | 0.150 | naca | -0.092 |
| cavin1b | 0.150 | snrpf | -0.091 |
| rbp4 | 0.149 | h2afva | -0.090 |
| itgb3a | 0.149 | rps23 | -0.090 |
| lgals1l1 | 0.149 | snu13b | -0.090 |
| si:dkey-16p21.8 | 0.148 | ptges3b | -0.089 |
| col17a1a | 0.146 | rps7 | -0.089 |
| cotl1 | 0.146 | btf3 | -0.089 |
| wu:fa03e10 | 0.145 | hnrnpaba | -0.089 |
| col5a1 | 0.144 | hnrnpa0l | -0.089 |
| col4a5 | 0.142 | syncrip | -0.089 |
| plecb | 0.141 | ddx39aa | -0.088 |
| si:ch211-39i22.1 | 0.140 | npm1a | -0.088 |
| itgb1b.2 | 0.140 | krt92 | -0.088 |
| si:dkey-33c14.3 | 0.137 | atp5if1a | -0.088 |
| zgc:86896 | 0.136 | rplp0 | -0.088 |
| capn2a | 0.135 | ddx39ab | -0.088 |
| col4a6 | 0.135 | setb | -0.087 |
| aep1 | 0.133 | rbm8a | -0.087 |
| gapdhs | 0.133 | cct2 | -0.086 |
| VIT | 0.133 | bud31 | -0.086 |
| krt91 | 0.132 | snrpe | -0.086 |
| rac2 | 0.132 | rps20 | -0.085 |