Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pax1a | 0.250 | prrx1a | -0.028 |
| pax1b | 0.201 | col9a1a | -0.026 |
| col8a1a | 0.120 | naca | -0.025 |
| LOC108179338 | 0.119 | sem1 | -0.024 |
| carm1l | 0.117 | mab21l2 | -0.023 |
| si:dkey-19a16.11 | 0.108 | rpl10 | -0.022 |
| LOC103910744.1 | 0.103 | six2a | -0.022 |
| LOC108182776 | 0.098 | col9a2 | -0.022 |
| XLOC-002665 | 0.090 | ybx1 | -0.021 |
| matn3b | 0.089 | zgc:110339 | -0.021 |
| tgfbi | 0.088 | rhoab | -0.021 |
| tnn | 0.086 | cavin2b | -0.021 |
| nkx3.2 | 0.085 | six1a | -0.020 |
| pax9 | 0.083 | osr1 | -0.020 |
| XLOC-014146 | 0.083 | tpt1 | -0.020 |
| si:ch1073-398c20.3 | 0.083 | cox7b | -0.020 |
| BX323457.1 | 0.081 | tbca | -0.020 |
| itga4 | 0.078 | pcolcea | -0.019 |
| LOC110439620 | 0.077 | gnb1a | -0.019 |
| zgc:171474 | 0.076 | hand2 | -0.019 |
| apoba | 0.073 | krt94 | -0.019 |
| si:ch73-106k19.2 | 0.072 | ndufa4l | -0.019 |
| pi15a | 0.072 | sf3b5 | -0.019 |
| ptch2 | 0.067 | rps16 | -0.019 |
| col1a1b | 0.066 | psmb7 | -0.018 |
| wif1 | 0.066 | s100v2 | -0.018 |
| tnc | 0.065 | cdh2 | -0.018 |
| pappa2 | 0.065 | eya1 | -0.018 |
| LOC101884949 | 0.065 | ucmab | -0.018 |
| emilin2b | 0.062 | adgrl2a | -0.018 |
| BX088718.1 | 0.061 | vamp3 | -0.018 |
| CU571091.1 | 0.060 | rpl13 | -0.018 |
| mxra5a | 0.060 | hpgd | -0.018 |
| FQ790367.1 | 0.059 | rpl27 | -0.018 |
| col5a2a | 0.059 | boc | -0.018 |