Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| ehd2a | 0.759 | arpc2 | -0.029 |
| AL935303.1 | 0.759 | pvalb1 | -0.027 |
| cacna1fa | 0.732 | hbbe1.3 | -0.026 |
| si:ch1073-110a20.7 | 0.471 | jun | -0.025 |
| FO082780.1 | 0.469 | lxn | -0.025 |
| pdzph1 | 0.468 | sparc | -0.025 |
| FO681288.3 | 0.456 | bhmt | -0.024 |
| XLOC-015089 | 0.454 | actc1b | -0.024 |
| CU914164.1 | 0.427 | tmem176 | -0.024 |
| lrp11 | 0.417 | anxa11a | -0.023 |
| npy | 0.412 | col5a1 | -0.022 |
| si:ch211-105f12.2 | 0.405 | hbae1.1 | -0.022 |
| otol1b | 0.395 | spcs3 | -0.022 |
| ush2a | 0.370 | pvalb2 | -0.022 |
| hs6st3a | 0.366 | tgfb3 | -0.022 |
| opn6a | 0.353 | si:dkey-7j14.6 | -0.021 |
| stxbp4 | 0.336 | COX7A2 (1 of many) | -0.021 |
| nploc4 | 0.299 | hspb1 | -0.021 |
| gad1a | 0.299 | svild | -0.021 |
| grik1b | 0.293 | naa10 | -0.021 |
| tmem260 | 0.272 | rpl9 | -0.020 |
| kif25 | 0.272 | cst14a.2 | -0.020 |
| si:ch1073-140o9.2 | 0.271 | id1 | -0.020 |
| FO704858.1 | 0.269 | cnn3a | -0.020 |
| gpr52 | 0.265 | emd | -0.020 |
| si:ch211-232m10.6 | 0.261 | id3 | -0.020 |
| CU929119.1 | 0.256 | eef1a1l1 | -0.020 |
| tmem30b | 0.252 | elovl1b | -0.019 |
| samd7 | 0.248 | pmp22a | -0.019 |
| ckmt2a | 0.247 | atox1 | -0.019 |
| zgc:103625 | 0.246 | krt18a.1 | -0.019 |
| itsn2a | 0.241 | btf3 | -0.019 |
| cnih3 | 0.239 | pkig | -0.019 |
| BX957322.1 | 0.234 | col1a2 | -0.019 |
| zgc:194621 | 0.230 | gsta.1 | -0.019 |