Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| col1a1b | 0.231 | hmgb2b | -0.133 |
| col11a1a | 0.230 | khdrbs1a | -0.132 |
| col1a2 | 0.228 | snrpd1 | -0.130 |
| col1a1a | 0.220 | h2afva | -0.129 |
| krt5 | 0.216 | h2afvb | -0.127 |
| col2a1b | 0.212 | snrpf | -0.126 |
| cotl1 | 0.211 | rbm8a | -0.125 |
| krtt1c19e | 0.207 | snrpb | -0.123 |
| postnb | 0.206 | apex1 | -0.122 |
| si:dkey-16p21.8 | 0.205 | h3f3a | -0.119 |
| col14a1b | 0.205 | hmgb1b | -0.119 |
| sparc | 0.200 | eef1a1l1 | -0.118 |
| rbp4 | 0.196 | snrpe | -0.118 |
| aep1 | 0.194 | hmgn2 | -0.116 |
| kera | 0.193 | cldnb | -0.115 |
| pfn1 | 0.192 | cfl1 | -0.114 |
| aqp3a | 0.192 | h3f3d | -0.114 |
| lgals1l1 | 0.189 | krt92 | -0.114 |
| krt91 | 0.187 | ptges3b | -0.113 |
| col4a5 | 0.185 | ddx39ab | -0.112 |
| hcls1 | 0.184 | magoh | -0.112 |
| itgav | 0.183 | cirbpb | -0.112 |
| col5a1 | 0.182 | hnrnpa0l | -0.111 |
| cldn1 | 0.180 | krt18a.1 | -0.110 |
| si:dkey-33c14.3 | 0.179 | rps23 | -0.110 |
| itgb1b.1 | 0.179 | syncrip | -0.109 |
| itgb4 | 0.177 | ran | -0.109 |
| capn2a | 0.176 | hmgn6 | -0.108 |
| gapdhs | 0.176 | snrpg | -0.107 |
| zgc:86896 | 0.175 | marcksb | -0.107 |
| spaca4l | 0.174 | atp5if1a | -0.106 |
| DSG2 | 0.174 | hnrnpabb | -0.106 |
| krt4 | 0.174 | hmga1a | -0.105 |
| s100a10b | 0.173 | ddx39aa | -0.105 |
| itgb1b.2 | 0.173 | setb | -0.105 |