Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hlx1 | 0.448 | epcam | -0.072 |
| btbd16 | 0.393 | icn | -0.061 |
| hoxc10a | 0.379 | hspa8 | -0.061 |
| cdc42ep1a | 0.377 | slc25a5 | -0.059 |
| glipr2l | 0.328 | h3f3d | -0.059 |
| foxf1 | 0.313 | cldn7b | -0.054 |
| LOC571123 | 0.303 | cirbpb | -0.054 |
| XLOC-041870 | 0.294 | gstp1 | -0.051 |
| XLOC-032954 | 0.284 | atp5pd | -0.051 |
| rnf180 | 0.282 | ppiab | -0.051 |
| BX088707.3 | 0.281 | btf3 | -0.050 |
| zdhhc3a | 0.280 | snrpb | -0.049 |
| si:dkey-28i19.3 | 0.280 | ndufa4l | -0.049 |
| rem1 | 0.271 | krt4 | -0.049 |
| syn2b | 0.267 | cox6b2 | -0.048 |
| LOC100334559 | 0.265 | rpl27 | -0.045 |
| ntn5 | 0.257 | dad1 | -0.045 |
| pimr192 | 0.256 | tmsb4x | -0.045 |
| pcsk5a | 0.253 | arpc3 | -0.045 |
| si:dkey-182o15.5 | 0.251 | dynlrb1 | -0.044 |
| eva1ba | 0.250 | ctsla | -0.044 |
| inka2 | 0.244 | cd9b | -0.044 |
| XLOC-024206 | 0.243 | abracl | -0.043 |
| stxbp6l | 0.233 | vdac1 | -0.043 |
| sync | 0.233 | tnks1bp1 | -0.042 |
| XLOC-028370 | 0.226 | hmgb2a | -0.041 |
| LOC110438055 | 0.222 | ddx39aa | -0.041 |
| LOC108181175 | 0.221 | mpc2 | -0.041 |
| pkdcca | 0.214 | anxa5b | -0.040 |
| rtel1 | 0.211 | snrpf | -0.039 |
| plcd4a | 0.208 | cyt1 | -0.039 |
| hist1h2a5 | 0.203 | psmd14 | -0.039 |
| LOC103910447 | 0.203 | psma1 | -0.038 |
| cep44 | 0.202 | mcl1b | -0.038 |
| LOC103911160 | 0.198 | pomp | -0.038 |