Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| si:dkey-102c8.3 | 0.062 | hmgb1b | -0.020 |
| cldn1 | 0.061 | marcksb | -0.019 |
| itgb3a | 0.061 | si:ch211-288g17.3 | -0.019 |
| spaca4l | 0.061 | si:ch211-137a8.4 | -0.018 |
| cldni | 0.060 | h2afva | -0.017 |
| ecrg4b | 0.060 | nova2 | -0.016 |
| itgb1b.1 | 0.059 | si:dkey-56m19.5 | -0.016 |
| myh9a | 0.057 | sox11b | -0.016 |
| zgc:101810 | 0.057 | tuba1c | -0.016 |
| zgc:86896 | 0.056 | ddx39ab | -0.015 |
| hcls1 | 0.055 | hdac1 | -0.015 |
| tagln2 | 0.055 | hes6 | -0.015 |
| thy1 | 0.055 | mdkb | -0.015 |
| pfn1 | 0.054 | snrpd1 | -0.015 |
| padi2 | 0.053 | sox3 | -0.015 |
| si:rp71-77l1.1 | 0.053 | tuba1a | -0.015 |
| tp63 | 0.053 | anp32e | -0.014 |
| zgc:113223 | 0.053 | cx43.4 | -0.014 |
| col14a1b | 0.052 | fabp3 | -0.014 |
| abi3b | 0.051 | gpm6aa | -0.014 |
| epgn | 0.051 | hnrnpa0a | -0.014 |
| lamb4 | 0.051 | hnrnpa1b | -0.014 |
| si:ch1073-406l10.2 | 0.051 | hnrnpub | -0.014 |
| zgc:171775 | 0.051 | ilf3b | -0.014 |
| aqp3a | 0.050 | nono | -0.014 |
| capn2a | 0.050 | setb | -0.014 |
| col18a1a | 0.049 | smarce1 | -0.014 |
| col5a3b | 0.049 | sox19a | -0.014 |
| col7a1 | 0.049 | top1l | -0.014 |
| flna | 0.049 | XLOC-003689 | -0.014 |
| fmodb | 0.049 | XLOC-003690 | -0.014 |
| hbegfa | 0.049 | XLOC-003692 | -0.014 |
| itga6b | 0.049 | her15.1 | -0.014 |
| lgals3b | 0.049 | apex1 | -0.013 |
| zgc:92380 | 0.049 | cbx3a | -0.013 |