| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| her5 | 0.199 | elavl3 | -0.107 |
| her11 | 0.186 | stmn1b | -0.105 |
| wls | 0.183 | rtn1a | -0.104 |
| wnt7ba | 0.148 | ptmaa | -0.101 |
| tpbga | 0.147 | tuba1c | -0.091 |
| otx2a | 0.130 | gpm6ab | -0.089 |
| zfp36l1a | 0.129 | tmsb | -0.089 |
| zic2b | 0.128 | ckbb | -0.088 |
| XLOC-032526 | 0.128 | gpm6aa | -0.087 |
| id1 | 0.123 | gng3 | -0.086 |
| pdgfaa | 0.123 | sncb | -0.083 |
| rspo2 | 0.123 | rtn1b | -0.080 |
| zic2a | 0.121 | atp6v0cb | -0.079 |
| wnt1 | 0.119 | elavl4 | -0.078 |
| sdc4 | 0.119 | rnasekb | -0.077 |
| efnb2b | 0.118 | tmsb4x | -0.076 |
| mdka | 0.118 | vamp2 | -0.075 |
| si:ch211-212k18.5 | 0.118 | marcksl1b | -0.074 |
| sox19a | 0.117 | tubb5 | -0.074 |
| tnfrsf19 | 0.117 | stmn2a | -0.072 |
| fabp11a | 0.116 | ywhag2 | -0.072 |
| cldn5a | 0.116 | mllt11 | -0.070 |
| id3 | 0.112 | stx1b | -0.070 |
| nop58 | 0.109 | stxbp1a | -0.070 |
| ranbp1 | 0.109 | si:dkeyp-75h12.5 | -0.069 |
| irx7 | 0.108 | gap43 | -0.069 |
| ccnd1 | 0.108 | gng2 | -0.069 |
| rspo3 | 0.107 | fez1 | -0.069 |
| npm1a | 0.105 | atp6v1e1b | -0.068 |
| ackr3a | 0.105 | dpysl3 | -0.068 |
| nop56 | 0.104 | ywhah | -0.068 |
| pcna | 0.104 | zgc:65894 | -0.067 |
| dkc1 | 0.103 | nsg2 | -0.067 |
| hmgb2a | 0.103 | atp6v1g1 | -0.065 |
| sox2 | 0.103 | tmsb2 | -0.065 |