| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nanog | 0.239 | eef1a1l1 | -0.215 |
| ccna1 | 0.229 | hmgb2a | -0.198 |
| acp5a | 0.227 | si:ch211-222l21.1 | -0.191 |
| mkrn4 | 0.223 | si:ch73-1a9.3 | -0.190 |
| cldnd | 0.217 | si:ch211-152c2.3 | -0.187 |
| spink2.1 | 0.215 | dynll1 | -0.187 |
| h2af1al | 0.215 | hnrnpa0b | -0.182 |
| h1m | 0.213 | hmga1a | -0.176 |
| rcor1 | 0.207 | hspb1 | -0.175 |
| gtf2a1 | 0.205 | rplp1 | -0.167 |
| dnajc1 | 0.205 | si:dkey-151g10.6 | -0.166 |
| zgc:173742 | 0.202 | ptmab | -0.165 |
| tent5c | 0.197 | hmgn6 | -0.154 |
| zgc:113424 | 0.196 | npm1a | -0.151 |
| rbm7 | 0.192 | anp32e | -0.150 |
| lamp2 | 0.189 | polr3gla | -0.149 |
| tent4b | 0.188 | rps7 | -0.148 |
| gpatch4 | 0.187 | rpl7a | -0.147 |
| ccnb2 | 0.187 | rps19 | -0.147 |
| npc2 | 0.185 | rps15a | -0.145 |
| gdf3 | 0.185 | rplp0 | -0.145 |
| si:dkey-68o6.5 | 0.184 | ybx1 | -0.144 |
| blf | 0.181 | aldob | -0.144 |
| arfip1 | 0.180 | rpl26 | -0.142 |
| mknk2a | 0.179 | marcksl1b | -0.141 |
| cdk8 | 0.179 | stm | -0.140 |
| ttf1 | 0.178 | apoeb | -0.137 |
| dctpp1 | 0.178 | rpl27 | -0.136 |
| mid1ip1l | 0.177 | rpl32 | -0.136 |
| pfn2 | 0.177 | rps2 | -0.135 |
| ctss2.1 | 0.176 | NC-002333.4 | -0.133 |
| si:ch211-132b12.8 | 0.176 | rps12 | -0.131 |
| klhl20 | 0.176 | rps5 | -0.130 |
| ska2 | 0.175 | rps6 | -0.129 |
| cth1 | 0.174 | add3b | -0.128 |