| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| msx2b | 0.291 | pvalb1 | -0.083 |
| XLOC-007662 | 0.289 | sfrp1a | -0.071 |
| LOC101884156 | 0.260 | sod1 | -0.070 |
| BX119915.3 | 0.244 | tmsb | -0.069 |
| zgc:165539 | 0.233 | ucp2 | -0.069 |
| LOC103910304 | 0.226 | eef1da | -0.066 |
| oc90 | 0.202 | pvalb2 | -0.066 |
| LOC110439442 | 0.198 | mb | -0.066 |
| CABZ01059627.1 | 0.196 | spint2 | -0.066 |
| BX005108.2 | 0.195 | tmem59 | -0.066 |
| msx1a | 0.194 | socs3a | -0.065 |
| dkk1b | 0.194 | krt15 | -0.062 |
| dlx3b | 0.185 | atp5if1b | -0.062 |
| actn2a | 0.180 | gabarapa | -0.062 |
| PARD3 (1 of many) | 0.179 | ier2b | -0.060 |
| greb1 | 0.172 | rplp2 | -0.059 |
| XLOC-042209 | 0.170 | zgc:158343 | -0.059 |
| XLOC-042210 | 0.170 | krt18b | -0.058 |
| lin28a | 0.166 | pvalb8 | -0.057 |
| XLOC-021187 | 0.154 | phlda2 | -0.057 |
| CU466287.1 | 0.154 | si:ch211-195b13.1 | -0.057 |
| si:dkey-7i4.10 | 0.152 | copz2 | -0.057 |
| rhd | 0.151 | plecb | -0.056 |
| mus81 | 0.150 | ppdpfb | -0.055 |
| grk1a | 0.149 | gapdhs | -0.055 |
| metrnla | 0.148 | mid1ip1b | -0.055 |
| cnr1 | 0.147 | ndrg2 | -0.055 |
| si:ch211-113a14.17 | 0.146 | mgst3b | -0.055 |
| dnmt3bb.2 | 0.146 | gsto2 | -0.055 |
| dlx4b | 0.146 | nme2b.1 | -0.055 |
| robo4 | 0.144 | rnasekb | -0.055 |
| paics | 0.144 | apoa2 | -0.054 |
| LOC564237 | 0.143 | clstn1 | -0.054 |
| XLOC-020450 | 0.143 | col9a1a | -0.054 |
| nop58 | 0.142 | kdm6bb | -0.053 |