ush1ga (axial mesoderm): Daniocell

Daniocell

ush1ga (axial mesoderm)

Usher syndrome 1Ga (autosomal recessive) ZFIN

Gene expression UMAP

Download UMAP

Other cell groups

all cells	blastomeres	PGCs	endoderm	axial mesoderm
muscle	mural cells / non-skeletal muscle	mesenchyme	hematopoietic / vasculature	pronephros
neural	spinal cord / glia	eye	taste / olfactory	otic / lateral line
epidermis	periderm	fin	ionocytes / mucous	pigment cells

Expression by stage/cluster

Correlated gene expression

Positive correlation		Negative correlation
Gene	r	Gene	r
CU929418.2	0.589	rplp1	-0.038
zgc:165604	0.468	rpl17	-0.035
CABZ01077555.1	0.421	rps13	-0.035
LOC108183612	0.393	tmem258	-0.034
BX323087.1	0.371	rpl5a	-0.034
BX664750.2	0.356	eef2b	-0.034
rlbp1a	0.351	col11a1a	-0.034
si:ch211-191j22.8	0.348	rpl26	-0.032
CABZ01118575.1	0.337	serpinh1b	-0.032
faah2a	0.336	col8a1a	-0.032
grm8b	0.335	col9a3	-0.032
LOC110439885	0.327	col9a1b	-0.032
zgc:153981	0.320	cnmd	-0.031
fads2	0.310	col9a2	-0.031
si:dkey-31j3.11	0.300	rps25	-0.031
RAMP1	0.291	ssr4	-0.031
si:dkeyp-104f11.9	0.283	rps29	-0.030
tbx4	0.261	rps24	-0.030
bicdl1	0.260	selenom	-0.030
CR936442.1	0.233	plod1a	-0.030
LOC110438357	0.230	zgc:113232	-0.029
LOC101886429	0.229	sec61g	-0.029
cabp5a	0.223	ier3ip1	-0.029
XLOC-031892	0.221	rpl27	-0.029
cyp2k31	0.214	rps28	-0.029
LOC101882171	0.214	fosab	-0.028
LOC101882521	0.212	krt18a.1	-0.028
tnfrsf11a	0.210	psmb6	-0.028
nectin1a	0.210	rpl21	-0.027
zwi	0.205	faua	-0.027
si:dkey-70b23.2	0.204	kdelr3	-0.027
gpr37a	0.202	serp1	-0.027
ccdc85cb	0.202	fkbp7	-0.027
clic3	0.199	col11a2	-0.027
crabp1a	0.198	tpm4a	-0.027