trim54 (axial mesoderm): Daniocell

Daniocell

trim54 (axial mesoderm)

tripartite motif containing 54 ZFIN

Gene expression UMAP

Download UMAP

Other cell groups

all cells	blastomeres	PGCs	endoderm	axial mesoderm
muscle	mural cells / non-skeletal muscle	mesenchyme	hematopoietic / vasculature	pronephros
neural	spinal cord / glia	eye	taste / olfactory	otic / lateral line
epidermis	periderm	fin	ionocytes / mucous	pigment cells

Expression by stage/cluster

Correlated gene expression

Positive correlation		Negative correlation
Gene	r	Gene	r
trpc2a	0.619	xbp1	-0.031
BX901889.1	0.619	ptmab	-0.030
LOC108182782	0.379	epyc	-0.024
b4galnt1a	0.329	cited4b	-0.024
LOC100536144	0.328	si:ch73-23l24.1	-0.023
XLOC-005580	0.305	col9a3	-0.023
CR545469.1	0.265	selenom	-0.023
BX927308.2	0.258	cnmd	-0.023
CABZ01066384.1	0.248	ctgfa	-0.022
izumo1	0.248	col11a2	-0.022
LOC110439992	0.248	matn3a	-0.022
LOC110440141	0.248	fxyd1	-0.022
si:dkey-202g17.3	0.231	si:dkey-151g10.6	-0.022
LOC108179220	0.230	zmp:0000000760	-0.021
bcl3	0.228	sdc2	-0.021
BX088718.1	0.228	zgc:113232	-0.021
vimr1	0.227	slc3a2a	-0.021
si:ch211-266k8.6	0.223	snorc	-0.021
zgc:91999	0.215	col2a1a	-0.020
tspan10	0.210	glyr1	-0.020
ngs	0.207	cnot6a	-0.020
LOC100333474	0.207	sec61g	-0.020
CU681836.1	0.204	foxa3	-0.019
dicp1.17	0.202	si:dkey-31g6.6	-0.019
LOC103909212	0.194	gas2b	-0.019
XLOC-015260	0.190	col11a1a	-0.019
tymp	0.190	si:ch73-46j18.5	-0.019
XLOC-014782	0.187	chad	-0.019
samd10b	0.185	zgc:153675	-0.019
ezra	0.178	kdelr2a	-0.019
tlr18	0.177	fgfr3	-0.019
adgrd1	0.175	hdlbpa	-0.019
prx	0.173	cmn	-0.019
ltb4r2b	0.168	utp3	-0.018
BX547930.1	0.166	mrpl54	-0.018