| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| noto | 0.252 | rpl37 | -0.111 |
| msx1b | 0.238 | fabp3 | -0.105 |
| sox19a | 0.238 | zgc:114188 | -0.104 |
| fgf8a | 0.237 | actc1b | -0.103 |
| sp8b | 0.236 | rps17 | -0.099 |
| ptgdsb.1 | 0.233 | rps10 | -0.099 |
| ptgdsb.2 | 0.229 | eef1da | -0.098 |
| XLOC-003690 | 0.226 | ttn.1 | -0.098 |
| sox2 | 0.214 | ttn.2 | -0.094 |
| her3 | 0.212 | vdac3 | -0.093 |
| tuba1a | 0.209 | tuba8l2 | -0.087 |
| nkx1.2la | 0.199 | pabpc4 | -0.085 |
| cdx4 | 0.197 | gamt | -0.085 |
| nradd | 0.189 | ak1 | -0.085 |
| apela | 0.184 | eif4a1b | -0.084 |
| si:ch211-137a8.4 | 0.178 | ckma | -0.083 |
| sp5l | 0.178 | atp2a1 | -0.083 |
| XLOC-003692 | 0.168 | ckmb | -0.083 |
| cdh6 | 0.165 | aldoab | -0.082 |
| adam8a | 0.165 | vdac2 | -0.081 |
| tll1 | 0.156 | tmem38a | -0.081 |
| ptmab | 0.156 | sparc | -0.081 |
| cpm | 0.155 | mylpfa | -0.079 |
| znfl2a | 0.155 | eno3 | -0.079 |
| sp5a | 0.155 | tnnc2 | -0.079 |
| hoxb7a | 0.153 | mdh2 | -0.079 |
| ube2e2 | 0.152 | bhmt | -0.079 |
| mdkb | 0.150 | acta1b | -0.079 |
| her2 | 0.149 | hsp90aa1.1 | -0.079 |
| hes6 | 0.149 | desma | -0.078 |
| gdf11 | 0.148 | zgc:158463 | -0.078 |
| hoxa9a | 0.147 | tpma | -0.078 |
| nasp | 0.146 | tob1b | -0.078 |
| si:ch211-222l21.1 | 0.146 | mybphb | -0.078 |
| mcm6 | 0.142 | acta1a | -0.078 |