| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| sox3 | 0.172 | tbxta | -0.164 |
| cxcr4b | 0.156 | cdx4 | -0.164 |
| cited4b | 0.153 | eve1 | -0.161 |
| si:dkey-228b2.6 | 0.150 | wnt11f2 | -0.126 |
| cxcr4a | 0.146 | tpbga | -0.111 |
| inka1a | 0.136 | apoc1 | -0.106 |
| glulb | 0.134 | hes6 | -0.100 |
| stm | 0.131 | wnt5b | -0.100 |
| ccnd1 | 0.129 | BX927327.1 | -0.100 |
| blf | 0.128 | ved | -0.089 |
| asb11 | 0.126 | osr1 | -0.087 |
| sox19a | 0.125 | sebox | -0.086 |
| CR383676.1 | 0.124 | wu:fb97g03 | -0.083 |
| marcksl1b | 0.124 | ndr2 | -0.080 |
| shisa2a | 0.122 | mespab | -0.079 |
| si:ch1073-80i24.3 | 0.121 | cdx1a | -0.073 |
| si:ch211-173m16.2 | 0.118 | id2a | -0.072 |
| ddx5 | 0.116 | lef1 | -0.072 |
| mex3b | 0.115 | zgc:162879 | -0.071 |
| vgll4l | 0.115 | aplnrb | -0.069 |
| mplkip | 0.112 | cyp27c1 | -0.069 |
| zic2b | 0.111 | bmp4 | -0.068 |
| dnajb1b | 0.109 | sp5a | -0.068 |
| gpd1b | 0.101 | lhx1a | -0.067 |
| AL935174.5 | 0.098 | msgn1 | -0.067 |
| pho | 0.096 | im:7138239 | -0.067 |
| foxd5 | 0.096 | znf503 | -0.067 |
| id1 | 0.095 | itm2cb | -0.066 |
| zgc:64022 | 0.095 | pik3r3b | -0.065 |
| si:ch73-1a9.3 | 0.095 | zswim5 | -0.064 |
| ctsla | 0.093 | aldh1a2 | -0.064 |
| foxd3 | 0.093 | atp1b3a | -0.063 |
| srsf5a | 0.089 | lft1 | -0.062 |
| epcam | 0.089 | plk3 | -0.062 |
| rcc1 | 0.089 | dld | -0.062 |