sigirr (all cells): Daniocell

Daniocell

sigirr (all cells)

single immunoglobulin and toll-interleukin 1 receptor (TIR) domain ZFIN

Gene expression UMAP

Download UMAP

Other cell groups

all cells	blastomeres	PGCs	endoderm	axial mesoderm
muscle	mural cells / non-skeletal muscle	mesenchyme	hematopoietic / vasculature	pronephros
neural	spinal cord / glia	eye	taste / olfactory	otic / lateral line
epidermis	periderm	fin	ionocytes / mucous	pigment cells

Expression by stage/cluster

Correlated gene expression

Positive correlation		Negative correlation
Gene	r	Gene	r
si:dkey-194e6.1	0.240	hmgb1b	-0.100
amn	0.232	marcksl1a	-0.095
pdzk1ip1	0.219	nova2	-0.091
spint2	0.219	tuba1c	-0.088
si:ch1073-443f11.2	0.215	gpm6aa	-0.087
tmprss2	0.215	hmgb3a	-0.087
cldnb	0.214	marcksb	-0.086
acy3.2	0.207	si:ch211-288g17.3	-0.084
slc5a9	0.207	gpm6ab	-0.081
ggt1b	0.202	hnrnpa0a	-0.080
si:dkey-87o1.2	0.202	mdkb	-0.080
cd9b	0.200	ckbb	-0.079
si:dkey-33i11.9	0.199	tuba1a	-0.077
cdh17	0.198	rtn1a	-0.076
si:ch211-132b12.2	0.196	tubb5	-0.076
slc26a6l	0.196	zc4h2	-0.075
rbm47	0.195	atp6v0cb	-0.074
si:ch73-185c24.2	0.195	jpt1b	-0.074
hnf1bb	0.192	tmeff1b	-0.074
smim1	0.191	celf2	-0.072
pdzk1	0.190	nucks1a	-0.072
tmem45b	0.189	elavl3	-0.071
zgc:101040	0.187	fam168a	-0.071
si:ch211-79k12.1	0.186	si:ch211-137a8.4	-0.070
epcam	0.185	si:dkey-276j7.1	-0.070
st3gal7	0.185	si:dkey-56m19.5	-0.070
clic5b	0.184	stmn1b	-0.069
ezra	0.183	CABZ01080702.1	-0.068
cldne	0.182	cspg5a	-0.067
lrrc66	0.182	msna	-0.066
slc22a4	0.182	si:ch211-133n4.4	-0.066
eps8l3b	0.181	chd4a	-0.064
tmem174	0.180	cadm3	-0.063
npr1b	0.179	h2afva	-0.063
slc26a1	0.179	mdka	-0.063