| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nkx2.4b | 0.308 | elavl3 | -0.060 |
| shha | 0.282 | gpm6ab | -0.058 |
| nkx2.2b | 0.282 | marcksl1b | -0.053 |
| nkx2.4a | 0.240 | stmn1b | -0.051 |
| fzd5 | 0.214 | elavl4 | -0.048 |
| slc1a3b | 0.210 | tubb5 | -0.046 |
| prdx1 | 0.208 | stmn2a | -0.046 |
| eno4 | 0.193 | cd99l2 | -0.044 |
| CRACR2A | 0.161 | zfhx3 | -0.043 |
| snai3 | 0.159 | zc4h2 | -0.042 |
| zgc:100951 | 0.156 | tmsb2 | -0.042 |
| nkx2.2a | 0.155 | scrt2 | -0.042 |
| vax2 | 0.155 | gap43 | -0.041 |
| fgfrl1a | 0.149 | stx1b | -0.041 |
| si:dkey-219c10.4 | 0.149 | sncb | -0.041 |
| sox1b | 0.146 | snap25a | -0.041 |
| six6a | 0.144 | mab21l1 | -0.040 |
| vax1 | 0.143 | tmsb | -0.040 |
| six6b | 0.139 | rbfox1 | -0.038 |
| rx3 | 0.135 | myt1la | -0.038 |
| LOC108191313 | 0.132 | tmsb4x | -0.038 |
| si:ch211-131k2.2 | 0.132 | mab21l2 | -0.038 |
| id3 | 0.130 | stxbp1a | -0.038 |
| zgc:174888 | 0.124 | rtn1b | -0.038 |
| daw1 | 0.123 | ebf3a | -0.038 |
| bsx | 0.120 | ywhag2 | -0.037 |
| CABZ01030107.1 | 0.118 | meis1b | -0.037 |
| efhd1 | 0.115 | nrn1a | -0.037 |
| zgc:165461 | 0.115 | pbx1a | -0.035 |
| th2 | 0.114 | cdk5r1b | -0.035 |
| ndufa4l2a | 0.104 | meis2a | -0.035 |
| ptch2 | 0.103 | gng3 | -0.034 |
| scgn | 0.103 | aplp1 | -0.034 |
| cd82a | 0.103 | ube2e3 | -0.034 |
| pacrg | 0.102 | csdc2a | -0.034 |