si:dkey-51d8.9 (axial mesoderm): Daniocell

Daniocell

si:dkey-51d8.9 (axial mesoderm)

si:dkey-51d8.9 ZFIN

Gene expression UMAP

Download UMAP

Other cell groups

all cells	blastomeres	PGCs	endoderm	axial mesoderm
muscle	mural cells / non-skeletal muscle	mesenchyme	hematopoietic / vasculature	pronephros
neural	spinal cord / glia	eye	taste / olfactory	otic / lateral line
epidermis	periderm	fin	ionocytes / mucous	pigment cells

Expression by stage/cluster

Correlated gene expression

Positive correlation		Negative correlation
Gene	r	Gene	r
trim35-23	0.392	net1	-0.028
CR626907.2	0.305	chrd	-0.027
jac8	0.303	si:rp71-45k5.4	-0.025
si:ch211-162k9.6	0.210	foxa3	-0.024
XLOC-020458	0.199	si:ch73-37h15.2	-0.024
cyp17a2	0.199	ywhaz	-0.023
lrrc74a	0.189	ccdc9	-0.023
CR626887.1	0.179	tmem33	-0.022
lpar5a	0.179	hnrnpua	-0.021
CABZ01056051.1	0.179	si:ch73-248e21.1	-0.021
csrp1b	0.168	marcksl1b	-0.021
foxg1c	0.166	senp2	-0.021
FP236157.4	0.163	vrtn	-0.021
ccl25a	0.161	srek1ip1	-0.020
si:ch211-145o7.3	0.160	ing3	-0.020
XLOC-025146	0.156	rimkla	-0.020
CR847793.1	0.155	siah1	-0.020
XLOC-043980	0.155	zic2b	-0.020
BX322618.1	0.152	fbxo18	-0.020
LOC108180139	0.151	zgc:63882	-0.020
ugt5b1	0.151	si:ch211-173m16.2	-0.020
LO018380.1	0.145	ccnb2	-0.020
LOC108180013	0.145	cnn3b	-0.020
si:ch211-246b8.2	0.142	polr2k	-0.020
CR759927.2	0.142	ddx6	-0.019
XLOC-039931	0.140	si:ch73-352p4.8	-0.019
ftr25	0.140	zgc:56676	-0.019
RF00151	0.139	matn4	-0.019
LOC110439420	0.137	trhra	-0.019
nmbb	0.137	mtdhb	-0.019
si:dkey-7j22.1	0.136	ccndbp1	-0.019
NC-002333.2	0.135	arl4ab	-0.019
lzts3b	0.133	rplp2	-0.019
XLOC-019120	0.132	polr2gl	-0.019
LOC100329560	0.130	sec62	-0.019